Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC124312.6-202ENST00000623624 418 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.86□□□□□ -1.79
SHMT2P34897 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.86□□□□□ -1.79
SHMT2P34897 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHMT2P34897 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.86□□□□□ -1.79
SHMT2P34897 AP002001.2-201ENST00000529025 1469 ntBASIC3.86□□□□□ -1.79
SHMT2P34897 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHMT2P34897 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.85□□□□□ -1.79
SHMT2P34897 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHMT2P34897 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SHMT2P34897 RNU6-146P-201ENST00000384602 108 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHMT2P34897 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 RNA5SP498-201ENST00000411342 120 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.85□□□□□ -1.79
SHMT2P34897 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.85□□□□□ -1.79
SHMT2P34897 MTCO1P52-201ENST00000433928 531 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.85□□□□□ -1.79
SHMT2P34897 AL500527.1-201ENST00000448532 255 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 RNU6-1218P-201ENST00000458990 108 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 RPL21P71-201ENST00000465598 459 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 VN1R105P-201ENST00000486595 910 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 AC146944.2-203ENST00000502493 354 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.85□□□□□ -1.79
SHMT2P34897 AC139495.1-202ENST00000513164 354 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.85□□□□□ -1.79
SHMT2P34897 RNA5SP179-201ENST00000517284 121 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 NARSP2-201ENST00000518524 679 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 HAUS1P3-201ENST00000523909 662 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SHMT2P34897 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.85□□□□□ -1.79
SHMT2P34897 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.85□□□□□ -1.79
SHMT2P34897 BNIP3P5-201ENST00000562290 498 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.85□□□□□ -1.79
SHMT2P34897 AC053481.4-201ENST00000583164 216 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 AC022916.3-201ENST00000592961 742 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.85□□□□□ -1.79
SHMT2P34897 MIR6875-201ENST00000617506 72 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.85□□□□□ -1.79
SHMT2P34897 AL356490.1-201ENST00000623079 479 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHMT2P34897 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHMT2P34897 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHMT2P34897 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SHMT2P34897 AC009501.3-201ENST00000605001 1352 ntBASIC3.85□□□□□ -1.79
SHMT2P34897 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SHMT2P34897 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SHMT2P34897 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHMT2P34897 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHMT2P34897 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHMT2P34897 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHMT2P34897 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHMT2P34897 XIAPP3-201ENST00000312918 795 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHMT2P34897 RNA5SP399-201ENST00000364003 117 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHMT2P34897 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHMT2P34897 ZNF965P-201ENST00000432501 817 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.84□□□□□ -1.79
SHMT2P34897 TBCAP1-201ENST00000436520 327 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.84□□□□□ -1.79
SHMT2P34897 RPL21P11-201ENST00000461458 483 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.84□□□□□ -1.79
SHMT2P34897 RN7SL132P-201ENST00000478131 296 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 OR9N1P-202ENST00000494289 481 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.84□□□□□ -1.79
SHMT2P34897 AC025459.1-201ENST00000504072 156 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.84□□□□□ -1.79
SHMT2P34897 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.84□□□□□ -1.79
SHMT2P34897 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.84□□□□□ -1.79
SHMT2P34897 AC135001.1-201ENST00000544546 283 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.84□□□□□ -1.79
SHMT2P34897 AC007424.1-203ENST00000554613 687 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 GNRHR2P1-201ENST00000555315 631 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AL049870.4-201ENST00000555741 486 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AC005255.1-201ENST00000593748 216 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.84□□□□□ -1.79
SHMT2P34897 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.84□□□□□ -1.79
SHMT2P34897 AC091167.4-201ENST00000605079 184 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AP003392.5-201ENST00000607857 415 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AP000255.1-201ENST00000610276 676 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 AC007342.8-201ENST00000623278 678 ntBASIC3.84□□□□□ -1.79
SHMT2P34897 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.84□□□□□ -1.79
SHMT2P34897 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.84□□□□□ -1.79
SHMT2P34897 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHMT2P34897 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHMT2P34897 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.84□□□□□ -1.79
SHMT2P34897 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHMT2P34897 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.84□□□□□ -1.8
SHMT2P34897 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.84□□□□□ -1.8
SHMT2P34897 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.84□□□□□ -1.8
SHMT2P34897 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
SHMT2P34897 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHMT2P34897 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SHMT2P34897 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
SHMT2P34897 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms