Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 NCOR1P1-202ENST00000486162 291 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AC004453.1-201ENST00000487895 408 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AC099522.1-202ENST00000514718 367 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AP001922.4-201ENST00000526967 290 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.16□□□□□ -1.74
CASQ1P31415 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CASQ1P31415 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.16□□□□□ -1.74
CASQ1P31415 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.16□□□□□ -1.74
CASQ1P31415 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.16□□□□□ -1.74
CASQ1P31415 AL161729.3-201ENST00000603533 673 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AL512624.1-201ENST00000613638 469 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CASQ1P31415 MIR6826-201ENST00000617808 98 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 AL139254.3-201ENST00000641097 674 ntBASIC4.16□□□□□ -1.74
CASQ1P31415 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CASQ1P31415 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CASQ1P31415 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CASQ1P31415 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CASQ1P31415 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CASQ1P31415 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.16□□□□□ -1.74
CASQ1P31415 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.16□□□□□ -1.74
CASQ1P31415 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.15□□□□□ -1.74
CASQ1P31415 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CASQ1P31415 IGKV7-3-201ENST00000357453 298 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 RNA5SP391-201ENST00000363456 119 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 RNA5SP87-201ENST00000384155 118 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.15□□□□□ -1.75
CASQ1P31415 RN7SKP229-201ENST00000410465 302 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.15□□□□□ -1.75
CASQ1P31415 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.15□□□□□ -1.75
CASQ1P31415 RPS15AP6-201ENST00000420703 385 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 COX6B1P7-201ENST00000430845 235 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 CKS1BP5-201ENST00000434172 273 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 HMGB1P12-201ENST00000438594 598 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.15□□□□□ -1.75
CASQ1P31415 RPL37P3-201ENST00000456825 293 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 AC083982.1-201ENST00000485679 344 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CASQ1P31415 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.15□□□□□ -1.75
CASQ1P31415 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.15□□□□□ -1.75
CASQ1P31415 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.15□□□□□ -1.75
CASQ1P31415 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.15□□□□□ -1.75
CASQ1P31415 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.15□□□□□ -1.75
CASQ1P31415 MIR4270-201ENST00000581799 70 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CASQ1P31415 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.15□□□□□ -1.75
CASQ1P31415 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.15□□□□□ -1.75
CASQ1P31415 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CASQ1P31415 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.15□□□□□ -1.75
CASQ1P31415 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.15□□□□□ -1.75
CASQ1P31415 AC090337.1-201ENST00000579651 2074 ntBASIC4.15□□□□□ -1.75
CASQ1P31415 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.15□□□□□ -1.75
CASQ1P31415 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CASQ1P31415 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CASQ1P31415 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CASQ1P31415 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CASQ1P31415 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASQ1P31415 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CASQ1P31415 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CASQ1P31415 RNA5SP399-201ENST00000364003 117 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 SNORA7.2-201ENST00000364446 145 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 DNAJC19P6-201ENST00000401853 280 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 RNU4-25P-201ENST00000410569 230 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC105402.1-201ENST00000413336 545 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASQ1P31415 RPL31P12-201ENST00000422587 358 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.14□□□□□ -1.75
CASQ1P31415 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.14□□□□□ -1.75
CASQ1P31415 ARL5AP3-201ENST00000439327 386 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 RPL23AP33-201ENST00000442301 452 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.14□□□□□ -1.75
CASQ1P31415 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.14□□□□□ -1.75
CASQ1P31415 U3.44-201ENST00000458938 192 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASQ1P31415 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.14□□□□□ -1.75
CASQ1P31415 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CASQ1P31415 NDUFB5P1-201ENST00000508134 564 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC067904.2-201ENST00000517322 1283 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.14□□□□□ -1.75
CASQ1P31415 RPL12P22-201ENST00000519073 490 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC025857.1-201ENST00000525252 377 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.14□□□□□ -1.75
CASQ1P31415 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.14□□□□□ -1.75
CASQ1P31415 AL845331.3-202ENST00000562856 261 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.14□□□□□ -1.75
CASQ1P31415 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.14□□□□□ -1.75
CASQ1P31415 MIR4738-201ENST00000579134 87 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.14□□□□□ -1.75
CASQ1P31415 AC068790.7-201ENST00000602347 528 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 MIR7151-201ENST00000617477 60 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 AL445528.2-201ENST00000620582 470 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 MIR4496-201ENST00000635896 61 ntBASIC4.14□□□□□ -1.75
CASQ1P31415 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CASQ1P31415 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CASQ1P31415 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CASQ1P31415 AL132640.2-201ENST00000559968 1698 ntBASIC4.13□□□□□ -1.75
CASQ1P31415 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.13□□□□□ -1.75
CASQ1P31415 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CASQ1P31415 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms