Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC046134.1-201ENST00000514454 666 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 SNORA20.3-201ENST00000516880 132 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 OR8Q1P-201ENST00000526467 655 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.39□□□□□ -1.55
HOXC12P31275 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC008752.3-201ENST00000588113 712 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.39□□□□□ -1.55
HOXC12P31275 AL365503.1-201ENST00000605247 905 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 AC011816.2-201ENST00000607089 556 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AC104260.1-201ENST00000616660 539 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AC245014.3-201ENST00000618589 347 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 AC009033.1-201ENST00000624279 431 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 AP005264.7-201ENST00000625003 745 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.39□□□□□ -1.55
HOXC12P31275 AL049767.1-202ENST00000637826 242 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 MTND4P12-201ENST00000498999 1377 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 MTND4P29-201ENST00000503122 1372 ntBASIC5.39□□□□□ -1.55
HOXC12P31275 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXC12P31275 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC12P31275 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC12P31275 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HOXC12P31275 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 AL133243.2-201ENST00000610331 1621 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 LINC01963-201ENST00000562038 3148 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 AC006511.3-201ENST00000624929 1783 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HOXC12P31275 RNA5SP110-201ENST00000362638 115 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 RNU6-343P-201ENST00000364709 104 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 RN7SKP292-201ENST00000365522 317 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 RNU6-1293P-201ENST00000384077 107 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC127391.1-201ENST00000411737 98 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXC12P31275 MTCO2P5-201ENST00000422621 426 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXC12P31275 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC004980.3-201ENST00000447046 365 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC005297.2-201ENST00000450430 606 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC12P31275 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC12P31275 RN7SL515P-201ENST00000463999 297 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC011476.1-201ENST00000466725 307 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC068522.1-201ENST00000482895 345 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC12P31275 RN7SKP238-201ENST00000516483 249 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 RNU6-358P-201ENST00000516564 75 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 RNU6-714P-201ENST00000516963 103 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXC12P31275 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC12P31275 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 OR4H6P-201ENST00000563771 921 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC025678.1-201ENST00000567861 338 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC027229.1-201ENST00000583887 253 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC12P31275 NF1P5-201ENST00000588287 448 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC123786.2-201ENST00000603459 275 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC012507.3-201ENST00000603556 477 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC007363.1-201ENST00000604736 620 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AL353621.2-201ENST00000605340 133 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AL390208.1-201ENST00000605885 644 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms