Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC027514.1-201ENST00000588561 1603 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
POLR2AP24928 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
POLR2AP24928 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.21□□□□□ -1.58
POLR2AP24928 RNA5SP124-201ENST00000362739 110 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 SNORD116.1-201ENST00000365628 92 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.21□□□□□ -1.58
POLR2AP24928 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.21□□□□□ -1.58
POLR2AP24928 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
POLR2AP24928 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.21□□□□□ -1.58
POLR2AP24928 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.21□□□□□ -1.58
POLR2AP24928 RPS20P14-201ENST00000412545 360 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.21□□□□□ -1.58
POLR2AP24928 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.21□□□□□ -1.58
POLR2AP24928 BTF3P9-201ENST00000418784 283 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.21□□□□□ -1.58
POLR2AP24928 AC007389.2-201ENST00000434630 306 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 AL606662.1-201ENST00000445763 553 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.21□□□□□ -1.58
POLR2AP24928 AC105031.1-201ENST00000518550 476 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
POLR2AP24928 UBE2NP1-201ENST00000545592 458 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.21□□□□□ -1.58
POLR2AP24928 AC139769.3-201ENST00000618383 175 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 AC008013.2-202ENST00000637965 364 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
POLR2AP24928 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
POLR2AP24928 AC104260.2-201ENST00000623551 3497 ntBASIC5.21□□□□□ -1.58
POLR2AP24928 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.21□□□□□ -1.58
POLR2AP24928 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
POLR2AP24928 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
POLR2AP24928 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
POLR2AP24928 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
POLR2AP24928 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.21□□□□□ -1.58
POLR2AP24928 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.21□□□□□ -1.58
POLR2AP24928 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 SNORA63.1-201ENST00000362493 131 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 RNU6-1331P-201ENST00000363658 106 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 RNU1-87P-201ENST00000363727 170 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 RNU4-75P-201ENST00000364621 146 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.2□□□□□ -1.58
POLR2AP24928 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
POLR2AP24928 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 RSL24D1P4-201ENST00000400938 484 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 RPL7P8-201ENST00000411964 730 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.2□□□□□ -1.58
POLR2AP24928 MTCO2P34-201ENST00000421994 607 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 Z74021.1-201ENST00000423610 407 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 NPM1P18-201ENST00000434232 732 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.2□□□□□ -1.58
POLR2AP24928 AC092393.1-201ENST00000439625 742 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 MTND2P20-201ENST00000440805 661 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC007327.1-201ENST00000447461 264 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 RNU7-157P-201ENST00000459600 66 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.2□□□□□ -1.58
POLR2AP24928 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.2□□□□□ -1.58
POLR2AP24928 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.2□□□□□ -1.58
POLR2AP24928 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC006539.2-201ENST00000601729 572 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.2□□□□□ -1.58
POLR2AP24928 MIR3653-201ENST00000625572 110 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.2□□□□□ -1.58
POLR2AP24928 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
POLR2AP24928 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
POLR2AP24928 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.2□□□□□ -1.58
POLR2AP24928 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
POLR2AP24928 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 SNORA62.3-201ENST00000365110 153 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 RNU6-1200P-201ENST00000384162 107 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 Y_RNA.560-201ENST00000384689 102 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.2□□□□□ -1.58
POLR2AP24928 AL663109.1-201ENST00000411498 844 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.2□□□□□ -1.58
POLR2AP24928 RPL21P43-201ENST00000425440 472 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 RPL37P1-201ENST00000432310 284 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.2□□□□□ -1.58
POLR2AP24928 AC068135.1-201ENST00000446164 246 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.2□□□□□ -1.58
POLR2AP24928 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 AL132838.2-201ENST00000492041 314 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 KCTD9P6-201ENST00000522306 950 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AP000873.5-201ENST00000533906 236 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 DUXAP1-201ENST00000556632 463 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.2□□□□□ -1.58
POLR2AP24928 VN1R88P-201ENST00000596787 292 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 VN1R82P-201ENST00000601481 356 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC069200.1-201ENST00000609511 323 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
POLR2AP24928 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC092159.4-201ENST00000624944 550 ntBASIC5.2□□□□□ -1.58
POLR2AP24928 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.2□□□□□ -1.58
POLR2AP24928 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.2□□□□□ -1.58
POLR2AP24928 FP325313.1-201ENST00000638228 703 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms