Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC107081.3-201ENST00000612715 2034 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AL158163.1-201ENST00000603915 1649 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC126755.2-208ENST00000327792 462 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC138969.1-213ENST00000331436 462 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 RNU1-14P-201ENST00000362759 152 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 SNORA62-201ENST00000365493 153 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 ATP5F1P6-201ENST00000402768 767 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 RAB28P1-201ENST00000411517 641 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC011933.1-201ENST00000413334 321 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 MFSD13B-201ENST00000420133 1290 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AL606495.1-201ENST00000422100 813 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 EIF4EP1-201ENST00000422311 642 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 UBE2V1P1-201ENST00000430836 445 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 RPS3AP54-201ENST00000435535 734 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 Z77249.1-201ENST00000444622 1175 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 BX248409.1-201ENST00000455497 255 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC116533.1-201ENST00000459748 321 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 RN7SL860P-201ENST00000473738 223 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 RN7SL691P-201ENST00000494487 301 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 KRT19P6-201ENST00000510983 209 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AP000916.1-201ENST00000533869 835 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 OR6C73P-201ENST00000546432 358 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC007424.1-203ENST00000554613 687 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 CYP4A43P-201ENST00000568156 121 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 MIR4504-201ENST00000577413 92 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC017100.2-201ENST00000584628 355 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AL445423.1-201ENST00000609941 536 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 VN1R9P-201ENST00000614184 867 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AL713922.2-201ENST00000619384 716 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC022079.2-201ENST00000619739 566 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AL669942.2-201ENST00000620352 697 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC020978.9-201ENST00000624380 1141 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC008013.2-202ENST00000637965 364 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 MTND5P3-201ENST00000438536 1800 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 AC011978.2-201ENST00000569835 2054 ntBASIC4.29□□□□□ -1.72
HLA-DPA1P20036 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AC024341.1-201ENST00000526444 1552 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 RNU6-481P-201ENST00000384194 107 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 RN7SKP235-201ENST00000410662 305 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 RPL21P110-201ENST00000433345 446 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AC074367.1-201ENST00000438685 1125 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 RPS20P32-201ENST00000456044 356 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 RN7SL303P-201ENST00000469773 251 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AC026979.1-201ENST00000492525 396 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 SOD1P3-201ENST00000518682 454 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AC104115.2-201ENST00000523026 687 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 VN1R88P-201ENST00000596787 292 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 BNIP3P4-201ENST00000604946 565 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AL031666.3-201ENST00000609320 1006 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 MIR7702-201ENST00000621931 59 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 AL356118.1-201ENST00000635272 1078 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms