Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.32□□□□□ -1.88
ATF1P18846 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.32□□□□□ -1.88
ATF1P18846 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ATF1P18846 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
ATF1P18846 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.31□□□□□ -1.88
ATF1P18846 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
ATF1P18846 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ATF1P18846 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.31□□□□□ -1.88
ATF1P18846 RNU6-891P-201ENST00000384280 111 ntBASIC3.31□□□□□ -1.88
ATF1P18846 MIR124-3-201ENST00000384866 87 ntBASIC3.31□□□□□ -1.88
ATF1P18846 MIR184-201ENST00000384962 84 ntBASIC3.31□□□□□ -1.88
ATF1P18846 MIR199A2-201ENST00000385289 110 ntBASIC3.31□□□□□ -1.88
ATF1P18846 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ATF1P18846 OR8G2P-201ENST00000412796 908 ntBASIC3.31□□□□□ -1.88
ATF1P18846 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.31□□□□□ -1.88
ATF1P18846 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 Z97055.1-201ENST00000419730 712 ntBASIC3.31□□□□□ -1.88
ATF1P18846 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.31□□□□□ -1.88
ATF1P18846 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 Z85994.2-201ENST00000434327 452 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 Z99127.2-201ENST00000441426 334 ntBASIC3.31□□□□□ -1.88
ATF1P18846 MTND2P8-201ENST00000450555 1025 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AC110792.1-201ENST00000491826 472 ntBASIC3.31□□□□□ -1.88
ATF1P18846 FTH1P24-201ENST00000503502 462 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AC021087.2-201ENST00000504656 1203 ntBASIC3.31□□□□□ -1.88
ATF1P18846 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.31□□□□□ -1.88
ATF1P18846 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.31□□□□□ -1.88
ATF1P18846 AC026784.1-201ENST00000507986 352 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AC147055.1-201ENST00000509261 750 ntBASIC3.31□□□□□ -1.88
ATF1P18846 MTCO3P42-201ENST00000509488 518 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 FTH1P9-201ENST00000513251 355 ntBASIC3.31□□□□□ -1.88
ATF1P18846 MTCO3P39-201ENST00000514812 518 ntBASIC3.31□□□□□ -1.88
ATF1P18846 NDUFA5P2-201ENST00000519723 344 ntBASIC3.31□□□□□ -1.88
ATF1P18846 MRPL49P2-201ENST00000521066 465 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.31□□□□□ -1.88
ATF1P18846 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.31□□□□□ -1.88
ATF1P18846 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.31□□□□□ -1.88
ATF1P18846 AC084033.1-201ENST00000550830 633 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.31□□□□□ -1.88
ATF1P18846 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.31□□□□□ -1.88
ATF1P18846 MIR3939-201ENST00000582614 106 ntBASIC3.31□□□□□ -1.88
ATF1P18846 KLKP1-201ENST00000595979 403 ntBASIC3.31□□□□□ -1.88
ATF1P18846 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.31□□□□□ -1.88
ATF1P18846 RMST_8.1-201ENST00000610287 165 ntBASIC3.31□□□□□ -1.88
ATF1P18846 MIR6820-201ENST00000611508 62 ntBASIC3.31□□□□□ -1.88
ATF1P18846 AL592295.2-201ENST00000612578 206 ntBASIC3.31□□□□□ -1.88
ATF1P18846 CR392039.4-201ENST00000624968 501 ntBASIC3.31□□□□□ -1.88
ATF1P18846 OR52H1-202ENST00000641796 1061 ntBASIC3.31□□□□□ -1.88
ATF1P18846 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATF1P18846 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
ATF1P18846 EXOC5P1-201ENST00000510543 1969 ntBASIC3.31□□□□□ -1.88
ATF1P18846 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATF1P18846 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.3□□□□□ -1.88
ATF1P18846 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.3□□□□□ -1.88
ATF1P18846 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ATF1P18846 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 DCAF13P1-201ENST00000495256 1330 ntBASIC3.3□□□□□ -1.88
ATF1P18846 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 RNA5SP443-201ENST00000363083 132 ntBASIC3.3□□□□□ -1.88
ATF1P18846 RNA5SP97-201ENST00000365006 84 ntBASIC3.3□□□□□ -1.88
ATF1P18846 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.3□□□□□ -1.88
ATF1P18846 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
ATF1P18846 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.3□□□□□ -1.88
ATF1P18846 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.3□□□□□ -1.88
ATF1P18846 HIGD1AP12-201ENST00000427832 281 ntBASIC3.3□□□□□ -1.88
ATF1P18846 ELOCP11-201ENST00000436690 332 ntBASIC3.3□□□□□ -1.88
ATF1P18846 AL031663.1-201ENST00000437445 219 ntBASIC3.3□□□□□ -1.88
ATF1P18846 ELOCP16-201ENST00000444494 332 ntBASIC3.3□□□□□ -1.88
ATF1P18846 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.3□□□□□ -1.88
ATF1P18846 RPL7L1P8-201ENST00000469911 741 ntBASIC3.3□□□□□ -1.88
ATF1P18846 RPS3AP50-201ENST00000487064 803 ntBASIC3.3□□□□□ -1.88
ATF1P18846 AC108941.1-201ENST00000502853 530 ntBASIC3.3□□□□□ -1.88
ATF1P18846 ATG10-AS1-201ENST00000504846 648 ntBASIC3.3□□□□□ -1.88
ATF1P18846 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.3□□□□□ -1.88
ATF1P18846 PCBP2P3-201ENST00000509726 843 ntBASIC3.3□□□□□ -1.88
ATF1P18846 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.3□□□□□ -1.88
ATF1P18846 RAC1P2-201ENST00000511164 579 ntBASIC3.3□□□□□ -1.88
ATF1P18846 SNORA70.14-201ENST00000516205 110 ntBASIC3.3□□□□□ -1.88
ATF1P18846 RNU6-1004P-201ENST00000516584 111 ntBASIC3.3□□□□□ -1.88
ATF1P18846 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 CDH12P4-201ENST00000517835 295 ntBASIC3.3□□□□□ -1.88
ATF1P18846 CDH12P3-201ENST00000517935 295 ntBASIC3.3□□□□□ -1.88
ATF1P18846 CDH12P1-201ENST00000518435 295 ntBASIC3.3□□□□□ -1.88
ATF1P18846 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATF1P18846 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.3□□□□□ -1.88
ATF1P18846 KPNA2P3-201ENST00000584190 848 ntBASIC3.3□□□□□ -1.88
ATF1P18846 AC115085.1-201ENST00000588924 229 ntBASIC3.3□□□□□ -1.88
ATF1P18846 AC069304.3-201ENST00000603938 1084 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms