Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGA1P17096 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGA1P17096 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.61□□□□□ -1.83
HMGA1P17096 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGA1P17096 YPEL5P2-201ENST00000605553 359 ntBASIC3.61□□□□□ -1.83
HMGA1P17096 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.61□□□□□ -1.83
HMGA1P17096 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGA1P17096 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGA1P17096 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGA1P17096 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGA1P17096 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HMGA1P17096 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGA1P17096 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGA1P17096 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HMGA1P17096 RNU4-44P-201ENST00000363050 141 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 CYP4F29P-201ENST00000420685 446 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 AC006989.1-201ENST00000427212 131 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 MRPS18BP2-201ENST00000434310 759 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGA1P17096 SKP1P1-201ENST00000438081 489 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 BTF3P5-201ENST00000457252 467 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 RN7SL807P-201ENST00000470923 297 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGA1P17096 DUXAP6-201ENST00000553858 601 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.6□□□□□ -1.83
HMGA1P17096 MIR7112-201ENST00000616126 65 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 AL158196.1-201ENST00000616786 434 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGA1P17096 AC127502.3-201ENST00000636170 1206 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.6□□□□□ -1.83
HMGA1P17096 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGA1P17096 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGA1P17096 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGA1P17096 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMGA1P17096 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGA1P17096 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
HMGA1P17096 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGA1P17096 RNU1-18P-201ENST00000363062 164 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 RNA5SP322-201ENST00000363617 119 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 MIR483-201ENST00000385070 76 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 RSL24D1P1-201ENST00000404972 493 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 RN7SKP56-201ENST00000410513 331 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 RPF2P1-201ENST00000424137 906 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 MTCO3P20-201ENST00000454926 688 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.59□□□□□ -1.83
HMGA1P17096 DSTNP2-201ENST00000504533 515 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 FCF1P8-201ENST00000510322 597 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 AC005798.1-201ENST00000513715 387 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGA1P17096 OR10D4P-201ENST00000525892 951 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGA1P17096 AC015802.5-201ENST00000607478 399 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGA1P17096 OR6C71P-202ENST00000641886 1107 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGA1P17096 MTND4P26-201ENST00000415971 1359 ntBASIC3.59□□□□□ -1.83
HMGA1P17096 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
HMGA1P17096 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HMGA1P17096 AC068647.1-201ENST00000489539 2265 ntBASIC3.59□□□□□ -1.84
HMGA1P17096 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
HMGA1P17096 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HMGA1P17096 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGA1P17096 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGA1P17096 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGA1P17096 RNU1-89P-201ENST00000384592 164 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGA1P17096 AC002524.1-201ENST00000411687 547 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGA1P17096 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGA1P17096 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.58□□□□□ -1.84
HMGA1P17096 AC115115.1-201ENST00000449927 248 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 AC005229.2-201ENST00000456995 399 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 RN7SKP57-201ENST00000517248 293 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 DUX4L52-201ENST00000549363 777 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.58□□□□□ -1.84
HMGA1P17096 AC037471.2-201ENST00000564941 598 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
HMGA1P17096 DDX6P1-205ENST00000441966 1436 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 HSPA8P19-201ENST00000505359 1517 ntBASIC3.58□□□□□ -1.84
HMGA1P17096 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HMGA1P17096 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
HMGA1P17096 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HMGA1P17096 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGA1P17096 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGA1P17096 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HMGA1P17096 AL391417.1-201ENST00000404100 426 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGA1P17096 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGA1P17096 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms