Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DOBP13765 AC093775.1-201ENST00000624154 1868 ntBASIC4.11□□□□□ -1.75
HLA-DOBP13765 AC005539.1-201ENST00000443768 1479 ntBASIC4.11□□□□□ -1.75
HLA-DOBP13765 AC010329.2-201ENST00000595195 2737 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 DBF4P1-201ENST00000412976 1892 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 RNU6-839P-201ENST00000363347 108 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 MIR217-201ENST00000384817 110 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 RNU6-757P-201ENST00000410334 100 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 RNA5SP80-201ENST00000410475 111 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 RN7SKP106-201ENST00000410832 272 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 USP9YP26-201ENST00000421008 661 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 ATP5F1P1-201ENST00000433775 569 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 SEPT7P5-201ENST00000434048 306 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 NPM1P33-201ENST00000438918 872 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 MTCYBP34-201ENST00000439552 670 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC104306.1-201ENST00000449702 371 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AL109741.2-201ENST00000455561 343 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 RPL37P3-201ENST00000456825 293 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 RPS27P23-201ENST00000487608 251 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC104090.1-201ENST00000506341 1171 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC079395.1-201ENST00000510981 262 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 snoU109.6-201ENST00000516831 118 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 RNA5SP135-201ENST00000517019 125 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC105185.1-201ENST00000518705 535 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 OR5D15P-201ENST00000531671 942 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 ELOCP32-201ENST00000548625 324 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC015726.1-201ENST00000602353 681 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 AL390838.2-201ENST00000602394 274 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC023813.4-201ENST00000607580 580 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC097505.1-201ENST00000610199 565 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC243654.2-201ENST00000612843 443 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AF001550.2-201ENST00000636643 217 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AL049737.1-201ENST00000413920 1403 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DOBP13765 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 KARSP3-201ENST00000571212 1504 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 AC108467.2-201ENST00000617640 1597 ntBASIC4.1□□□□□ -1.75
HLA-DOBP13765 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DOBP13765 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOBP13765 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOBP13765 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOBP13765 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOBP13765 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL512646.1-201ENST00000269395 1077 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC021146.4-201ENST00000309229 279 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 FAM3C2-201ENST00000312214 681 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 RNA5SP151-201ENST00000365632 117 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 ATP5F1P3-201ENST00000397213 657 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 MIR921-201ENST00000401133 56 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms