Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MIR448-201ENST00000362131 111 ntBASIC3.96□□□□□ -1.78
COL11A1P12107 BMS1P3-201ENST00000372011 932 ntBASIC3.96□□□□□ -1.78
COL11A1P12107 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.96□□□□□ -1.78
COL11A1P12107 AL160275.2-201ENST00000412010 394 ntBASIC3.96□□□□□ -1.78
COL11A1P12107 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A1P12107 NPM1P17-201ENST00000479221 602 ntBASIC3.96□□□□□ -1.78
COL11A1P12107 RPS3AP14-201ENST00000483907 780 ntBASIC3.96□□□□□ -1.78
COL11A1P12107 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A1P12107 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A1P12107 DPRXP4-201ENST00000578053 568 ntBASIC3.96□□□□□ -1.78
COL11A1P12107 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A1P12107 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.96□□□□□ -1.78
COL11A1P12107 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A1P12107 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A1P12107 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A1P12107 Z82217.1-201ENST00000625157 8149 ntBASIC3.96□□□□□ -1.78
COL11A1P12107 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A1P12107 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.96□□□□□ -1.78
COL11A1P12107 AL022311.1-201ENST00000623726 19416 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL11A1P12107 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A1P12107 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A1P12107 AC063979.1-201ENST00000415539 377 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 RPL37P3-201ENST00000456825 293 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.95□□□□□ -1.78
COL11A1P12107 UBE2NP1-201ENST00000545592 458 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.95□□□□□ -1.78
COL11A1P12107 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A1P12107 OTUD4P1-201ENST00000237841 3067 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.95□□□□□ -1.78
COL11A1P12107 AL133383.2-201ENST00000622958 2336 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL11A1P12107 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.95□□□□□ -1.78
COL11A1P12107 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
COL11A1P12107 GNG5P1-201ENST00000255500 204 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A1P12107 SNORA48.2-201ENST00000390926 124 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 RN7SKP111-201ENST00000410349 271 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 RNA5SP39-201ENST00000411245 120 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AC017078.1-201ENST00000416146 368 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 RPL6P21-201ENST00000418672 846 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A1P12107 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 HMGB1P16-201ENST00000447155 540 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 BTF3L4P4-201ENST00000506381 449 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AC005798.1-201ENST00000513715 387 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A1P12107 AC008489.1-201ENST00000524271 483 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A1P12107 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A1P12107 AC068790.5-201ENST00000602741 355 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AL606834.2-201ENST00000602954 668 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 AC105227.2-201ENST00000615075 605 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 MIR7112-201ENST00000616126 65 ntBASIC3.95□□□□□ -1.78
COL11A1P12107 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
COL11A1P12107 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
COL11A1P12107 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A1P12107 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.95□□□□□ -1.78
COL11A1P12107 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.94□□□□□ -1.78
COL11A1P12107 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL11A1P12107 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL11A1P12107 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.94□□□□□ -1.78
COL11A1P12107 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.94□□□□□ -1.78
COL11A1P12107 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COL11A1P12107 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL11A1P12107 IFNNP1-201ENST00000429219 553 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 AF228730.2-201ENST00000438784 848 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.94□□□□□ -1.78
COL11A1P12107 IGKV2-26-201ENST00000518305 343 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 HIGD1AP18-201ENST00000520730 278 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.94□□□□□ -1.78
COL11A1P12107 AC011611.1-201ENST00000552179 197 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.94□□□□□ -1.78
COL11A1P12107 MIR5004-201ENST00000579078 107 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.94□□□□□ -1.78
COL11A1P12107 AL359715.5-201ENST00000623431 443 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL11A1P12107 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.94□□□□□ -1.78
COL11A1P12107 SCN1A-220ENST00000641603 12506 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL11A1P12107 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
COL11A1P12107 AC020633.1-201ENST00000468439 2247 ntBASIC3.94□□□□□ -1.78
COL11A1P12107 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.93□□□□□ -1.78
COL11A1P12107 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL11A1P12107 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.93□□□□□ -1.78
COL11A1P12107 ELOCP18-201ENST00000434209 337 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 RSL24D1P3-201ENST00000449255 495 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.93□□□□□ -1.78
COL11A1P12107 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.93□□□□□ -1.78
COL11A1P12107 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.93□□□□□ -1.78
COL11A1P12107 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.93□□□□□ -1.78
COL11A1P12107 OOSP1P2-201ENST00000579644 351 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.93□□□□□ -1.78
COL11A1P12107 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL11A1P12107 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL11A1P12107 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.93□□□□□ -1.78
COL11A1P12107 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL11A1P12107 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
COL11A1P12107 RNU1-70P-201ENST00000362618 164 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms