Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.54□□□□□ -1.84
UBCP0CG48 CEACAMP4-201ENST00000457676 421 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 AC116533.1-201ENST00000459748 321 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 RN7SL93P-201ENST00000463035 293 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 AC010307.1-201ENST00000467206 836 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 AC104689.1-201ENST00000473356 768 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.54□□□□□ -1.84
UBCP0CG48 AP001086.1-201ENST00000494882 321 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 HPRT1P2-201ENST00000505250 544 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.54□□□□□ -1.84
UBCP0CG48 AC099522.1-202ENST00000514718 367 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 MTCO1P30-201ENST00000515244 580 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 RNU4-60P-201ENST00000517239 135 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.54□□□□□ -1.84
UBCP0CG48 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.54□□□□□ -1.84
UBCP0CG48 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.54□□□□□ -1.84
UBCP0CG48 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.54□□□□□ -1.84
UBCP0CG48 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.54□□□□□ -1.84
UBCP0CG48 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.54□□□□□ -1.84
UBCP0CG48 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.54□□□□□ -1.84
UBCP0CG48 AC025627.2-201ENST00000576220 160 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 MIR4715-201ENST00000584117 79 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 AL021707.7-201ENST00000607991 416 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 AC012531.5-201ENST00000611375 151 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 AC100827.5-201ENST00000615883 426 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 AC121761.2-201ENST00000617300 689 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBCP0CG48 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
UBCP0CG48 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBCP0CG48 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBCP0CG48 MTND5P3-201ENST00000438536 1800 ntBASIC3.54□□□□□ -1.84
UBCP0CG48 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 AL353746.1-201ENST00000566293 6881 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 DDX6P1-205ENST00000441966 1436 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
UBCP0CG48 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 RNA5SP447-201ENST00000363749 119 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 RNA5SP505-201ENST00000364748 108 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 MIR323B-201ENST00000385269 82 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 NUP35P2-201ENST00000416748 943 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 AL691447.1-201ENST00000419456 387 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 AC007394.1-201ENST00000421941 531 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.53□□□□□ -1.84
UBCP0CG48 COX6B1P7-201ENST00000430845 235 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 AL358472.1-201ENST00000431295 329 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 BTF3P10-201ENST00000433415 495 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.53□□□□□ -1.84
UBCP0CG48 AL138878.2-201ENST00000440581 1241 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 RPL38P1-201ENST00000460914 211 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 PPIAP15-201ENST00000479662 484 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.53□□□□□ -1.84
UBCP0CG48 KRT19P6-201ENST00000510983 209 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.53□□□□□ -1.84
UBCP0CG48 MTND1P6-201ENST00000523621 946 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
UBCP0CG48 OR8L1P-201ENST00000534005 955 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 AC069366.1-201ENST00000583159 838 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 AC011374.2-201ENST00000607135 526 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.53□□□□□ -1.84
UBCP0CG48 AL355480.1-201ENST00000629041 99 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
UBCP0CG48 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.53□□□□□ -1.84
UBCP0CG48 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBCP0CG48 UBE3AP2-201ENST00000429033 2259 ntBASIC3.53□□□□□ -1.85
UBCP0CG48 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.52□□□□□ -1.85
UBCP0CG48 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBCP0CG48 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.52□□□□□ -1.85
UBCP0CG48 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBCP0CG48 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBCP0CG48 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBCP0CG48 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBCP0CG48 RNU1-132P-201ENST00000364300 164 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 RNU6-40P-201ENST00000384254 107 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 MIR142-201ENST00000384835 87 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 HMGN2P8-201ENST00000391458 268 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 ELOCP19-201ENST00000411919 318 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.52□□□□□ -1.85
UBCP0CG48 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.52□□□□□ -1.85
UBCP0CG48 AC017083.1-201ENST00000428093 483 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 KCTD9P3-201ENST00000434597 1169 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBCP0CG48 AL138799.3-201ENST00000438968 350 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 AC097499.1-201ENST00000444277 208 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 AL162151.2-201ENST00000448875 158 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 RPS20P32-201ENST00000456044 356 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 RN7SL738P-201ENST00000470264 297 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.52□□□□□ -1.85
UBCP0CG48 RN7SL604P-201ENST00000492589 296 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 TRAV31-201ENST00000502780 342 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 IGBP1P5-201ENST00000507524 1000 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 AC008494.2-201ENST00000514544 370 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms