Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNRPA1P09661 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.66□□□□□ -1.5
SNRPA1P09661 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.66□□□□□ -1.5
SNRPA1P09661 MRPS35P3-201ENST00000603189 709 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AC021749.1-201ENST00000604322 607 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 ZYXP1-201ENST00000617638 118 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AC010608.2-201ENST00000624830 470 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 MIR492-201ENST00000638676 116 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.66□□□□□ -1.5
SNRPA1P09661 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNRPA1P09661 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNRPA1P09661 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.66□□□□□ -1.5
SNRPA1P09661 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SNRPA1P09661 AP000542.2-201ENST00000623199 6179 ntBASIC5.66□□□□□ -1.5
SNRPA1P09661 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.65□□□□□ -1.5
SNRPA1P09661 AL672167.1-204ENST00000641875 3017 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNRPA1P09661 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SNRPA1P09661 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNRPA1P09661 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNRPA1P09661 MIR383-201ENST00000362257 73 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 AC002524.1-201ENST00000411687 547 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 NRBF2P2-201ENST00000413087 861 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.65□□□□□ -1.5
SNRPA1P09661 AL031779.1-201ENST00000415663 330 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.65□□□□□ -1.5
SNRPA1P09661 RPL17P36-201ENST00000420302 549 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.65□□□□□ -1.5
SNRPA1P09661 RPL21P91-201ENST00000429231 479 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.65□□□□□ -1.5
SNRPA1P09661 KCTD10P1-201ENST00000434203 625 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 UBE2V1P3-201ENST00000439651 417 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.65□□□□□ -1.5
SNRPA1P09661 RPS27AP8-201ENST00000452665 445 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.65□□□□□ -1.5
SNRPA1P09661 ANKRD26P4-201ENST00000455755 950 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 RPL31P3-201ENST00000458430 332 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 RPL7AP28-201ENST00000464513 571 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 MTND3P7-201ENST00000474435 343 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.65□□□□□ -1.5
SNRPA1P09661 AC069304.1-201ENST00000491593 704 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 RN7SL691P-201ENST00000494487 301 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.65□□□□□ -1.5
SNRPA1P09661 OR5H4P-201ENST00000510851 923 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNRPA1P09661 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.65□□□□□ -1.5
SNRPA1P09661 snoZ278.1-201ENST00000517059 112 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.65□□□□□ -1.5
SNRPA1P09661 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.65□□□□□ -1.5
SNRPA1P09661 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.65□□□□□ -1.5
SNRPA1P09661 AC122134.1-201ENST00000565664 1104 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 AC135628.1-201ENST00000568867 534 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.65□□□□□ -1.5
SNRPA1P09661 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNRPA1P09661 AC013562.2-201ENST00000611632 603 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 HULC.1-201ENST00000612720 240 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.65□□□□□ -1.5
SNRPA1P09661 AC024023.1-201ENST00000624530 922 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 RNA5SP196-201ENST00000625967 102 ntBASIC5.65□□□□□ -1.5
SNRPA1P09661 AC073055.1-201ENST00000456901 1621 ntBASIC5.65□□□□□ -1.51
SNRPA1P09661 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNRPA1P09661 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNRPA1P09661 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNRPA1P09661 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SNRPA1P09661 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNRPA1P09661 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.65□□□□□ -1.51
SNRPA1P09661 AL049737.1-201ENST00000413920 1403 ntBASIC5.65□□□□□ -1.51
SNRPA1P09661 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNRPA1P09661 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SNRPA1P09661 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC006042.3-201ENST00000454684 1469 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.64□□□□□ -1.51
SNRPA1P09661 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SNRPA1P09661 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.64□□□□□ -1.51
SNRPA1P09661 AL022393.1-201ENST00000625142 1677 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.64□□□□□ -1.51
SNRPA1P09661 SNORD116-4-201ENST00000384733 96 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 OR2AH1P-201ENST00000425717 928 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AC234781.2-201ENST00000426370 994 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 YWHAEP5-201ENST00000431545 765 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.64□□□□□ -1.51
SNRPA1P09661 OR4C10P-201ENST00000434991 931 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 MTND1P34-201ENST00000438556 671 ntBASIC5.64□□□□□ -1.51
SNRPA1P09661 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNRPA1P09661 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.64□□□□□ -1.51
SNRPA1P09661 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.64□□□□□ -1.51
SNRPA1P09661 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms