Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC6P09630 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC6P09630 RN7SL622P-201ENST00000585292 275 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AC012254.4-201ENST00000588843 273 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC6P09630 AC010201.1-201ENST00000605051 540 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AC080013.6-201ENST00000606185 215 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC6P09630 PART1_2.1-201ENST00000612397 250 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AC099669.2-201ENST00000616549 437 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 MIR7151-201ENST00000617477 60 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC6P09630 AC005086.4-201ENST00000623065 213 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 AC104985.3-201ENST00000623479 597 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC6P09630 AC008013.2-202ENST00000637965 364 ntBASIC4.82□□□□□ -1.64
HOXC6P09630 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC6P09630 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
HOXC6P09630 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC6P09630 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HOXC6P09630 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC6P09630 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
HOXC6P09630 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC6P09630 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC6P09630 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC6P09630 AC099786.3-201ENST00000565735 1410 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HOXC6P09630 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC6P09630 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC6P09630 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC6P09630 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC6P09630 AC106871.1-201ENST00000568324 3102 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC6P09630 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC6P09630 RNU11-4P-201ENST00000391149 133 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXC6P09630 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC6P09630 AL078604.1-201ENST00000404609 466 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 RN7SKP167-201ENST00000411047 285 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 RNU4-22P-201ENST00000411058 166 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXC6P09630 XKRYP4-201ENST00000414395 483 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 RBMY1KP-201ENST00000423480 476 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 TXNL1P1-201ENST00000429528 554 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AC018644.1-201ENST00000429934 551 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 RPS6P15-201ENST00000431996 751 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 CEACAMP1-201ENST00000434624 1035 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC6P09630 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC6P09630 RPS27P5-201ENST00000444247 244 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC6P09630 XKRYP5-201ENST00000449659 483 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AC098583.1-201ENST00000480875 255 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC6P09630 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC6P09630 AC135279.1-201ENST00000543493 504 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HOXC6P09630 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC6P09630 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXC6P09630 AC024220.1-201ENST00000603675 484 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC6P09630 AL159169.2-201ENST00000610061 1269 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC6P09630 AC078883.4-201ENST00000623218 367 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 AC007546.2-201ENST00000623996 360 ntBASIC4.81□□□□□ -1.64
HOXC6P09630 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXC6P09630 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC6P09630 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC6P09630 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC6P09630 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC6P09630 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC6P09630 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC6P09630 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 AL672167.2-201ENST00000377164 879 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 TPT1P2-201ENST00000413105 503 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 RPS24P7-201ENST00000416921 246 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXC6P09630 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC6P09630 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC6P09630 AL133547.1-201ENST00000448546 220 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 AL591623.2-201ENST00000449978 222 ntBASIC4.8□□□□□ -1.64
HOXC6P09630 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC6P09630 PTGES3P5-201ENST00000455109 434 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms