Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 XKRYP3-201ENST00000442113 1116 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC4P09017 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC4P09017 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC4P09017 SNORA84-201ENST00000459229 133 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 RPL21P71-201ENST00000465598 459 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 RPS26P15-201ENST00000488067 348 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC4P09017 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 SNORA67.7-201ENST00000516664 135 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC4P09017 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXC4P09017 DEFB109D-201ENST00000529497 240 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 GNRHR2P1-201ENST00000555315 631 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.83□□□□□ -1.8
HOXC4P09017 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.83□□□□□ -1.8
HOXC4P09017 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC4P09017 MIR4644-201ENST00000579929 84 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 MIR3158-1-201ENST00000583596 81 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 RPL21P136-201ENST00000605378 396 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AC026790.2-201ENST00000606282 430 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AC005021.1-201ENST00000608730 355 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 uc_338.32-201ENST00000615087 172 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AL391262.2-201ENST00000622466 494 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AC106730.3-201ENST00000624568 641 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AC119674.1-212ENST00000641155 993 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AL163152.1-201ENST00000642001 374 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 AC017007.4-201ENST00000503353 1352 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 AP004289.2-201ENST00000444413 1457 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 AC114546.3-201ENST00000623582 1734 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC4P09017 OR4A15-201ENST00000314706 1035 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 RNU4-23P-201ENST00000362839 140 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 RNU6-1279P-201ENST00000383917 103 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 MIR320B1-201ENST00000390209 79 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HOXC4P09017 PTMAP2-201ENST00000397627 327 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC4P09017 AL590704.1-201ENST00000402856 794 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 DHFRP5-201ENST00000406944 564 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXC4P09017 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC4P09017 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 RPS6P14-201ENST00000425165 719 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC4P09017 AL390879.2-203ENST00000426943 1121 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 AC018644.1-201ENST00000429934 551 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 AL035246.1-201ENST00000433554 1255 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 RANP8-201ENST00000444720 713 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 AL133547.1-201ENST00000448546 220 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 AL500522.2-201ENST00000448562 343 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 SYT14P1-201ENST00000481459 721 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 RPL31P61-201ENST00000496160 376 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 AC034244.2-201ENST00000514668 858 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 SCARNA14-201ENST00000516903 136 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 RNU6-352P-201ENST00000516908 107 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 RNU1-45P-201ENST00000517191 141 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 AC023632.4-201ENST00000517783 191 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC4P09017 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC4P09017 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXC4P09017 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC4P09017 AC092474.3-201ENST00000603022 568 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 PSMA6P4-201ENST00000603247 718 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 HMGB1P50-201ENST00000605814 607 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC4P09017 AC020978.9-201ENST00000624380 1141 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC4P09017 HPVC1-201ENST00000629899 1198 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC4P09017 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC4P09017 AC018555.1-201ENST00000567548 1980 ntBASIC3.82□□□□□ -1.8
HOXC4P09017 CYP1D1P-201ENST00000416662 1433 ntBASIC3.81□□□□□ -1.8
HOXC4P09017 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC4P09017 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC4P09017 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC4P09017 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC4P09017 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC4P09017 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC4P09017 AL591419.1-201ENST00000427423 339 ntBASIC3.81□□□□□ -1.8
HOXC4P09017 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC4P09017 ELOCP8-201ENST00000439309 332 ntBASIC3.81□□□□□ -1.8
HOXC4P09017 ELOCP15-201ENST00000442090 332 ntBASIC3.81□□□□□ -1.8
HOXC4P09017 VN1R25P-201ENST00000443385 738 ntBASIC3.81□□□□□ -1.8
HOXC4P09017 VN1R40P-201ENST00000455196 941 ntBASIC3.81□□□□□ -1.8
HOXC4P09017 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC4P09017 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC4P09017 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC4P09017 RPL7P24-201ENST00000493052 752 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms