Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RB1P06400 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.69□□□□□ -1.66
RB1P06400 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RB1P06400 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.69□□□□□ -1.66
RB1P06400 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RB1P06400 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RB1P06400 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RB1P06400 MIR670-201ENST00000390142 98 ntBASIC4.69□□□□□ -1.66
RB1P06400 VN1R51P-201ENST00000411675 945 ntBASIC4.69□□□□□ -1.66
RB1P06400 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.69□□□□□ -1.66
RB1P06400 RPL7P4-203ENST00000430239 730 ntBASIC4.69□□□□□ -1.66
RB1P06400 RPL21P110-201ENST00000433345 446 ntBASIC4.69□□□□□ -1.66
RB1P06400 MTND1P33-201ENST00000446251 917 ntBASIC4.69□□□□□ -1.66
RB1P06400 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.69□□□□□ -1.66
RB1P06400 AC022795.1-201ENST00000473808 480 ntBASIC4.69□□□□□ -1.66
RB1P06400 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.69□□□□□ -1.66
RB1P06400 AC091959.2-201ENST00000477363 321 ntBASIC4.69□□□□□ -1.66
RB1P06400 AC073522.1-201ENST00000483312 377 ntBASIC4.69□□□□□ -1.66
RB1P06400 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
RB1P06400 MIR4716-201ENST00000579628 84 ntBASIC4.69□□□□□ -1.66
RB1P06400 AC233280.2-201ENST00000603917 1070 ntBASIC4.69□□□□□ -1.66
RB1P06400 FAM27D1-201ENST00000612308 341 ntBASIC4.69□□□□□ -1.66
RB1P06400 MIR8069-1-201ENST00000616627 86 ntBASIC4.69□□□□□ -1.66
RB1P06400 MIR8069-2-201ENST00000621412 86 ntBASIC4.69□□□□□ -1.66
RB1P06400 AC015804.1-201ENST00000622935 435 ntBASIC4.69□□□□□ -1.66
RB1P06400 AC090772.4-201ENST00000623599 362 ntBASIC4.69□□□□□ -1.66
RB1P06400 AC010608.3-201ENST00000625048 527 ntBASIC4.69□□□□□ -1.66
RB1P06400 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 AL049555.1-201ENST00000562834 1933 ntBASIC4.69□□□□□ -1.66
RB1P06400 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RB1P06400 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RB1P06400 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RB1P06400 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 AL133243.3-201ENST00000617415 3004 ntBASIC4.69□□□□□ -1.66
RB1P06400 AL672167.1-204ENST00000641875 3017 ntBASIC4.69□□□□□ -1.66
RB1P06400 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RB1P06400 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.69□□□□□ -1.66
RB1P06400 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.68□□□□□ -1.66
RB1P06400 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RB1P06400 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.68□□□□□ -1.66
RB1P06400 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RB1P06400 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RB1P06400 RNU5E-10P-201ENST00000363506 118 ntBASIC4.68□□□□□ -1.66
RB1P06400 RNU6-236P-201ENST00000363886 106 ntBASIC4.68□□□□□ -1.66
RB1P06400 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.68□□□□□ -1.66
RB1P06400 SNORA51.12-201ENST00000384448 134 ntBASIC4.68□□□□□ -1.66
RB1P06400 MCTS2P-201ENST00000394552 546 ntBASIC4.68□□□□□ -1.66
RB1P06400 PTMAP2-201ENST00000397627 327 ntBASIC4.68□□□□□ -1.66
RB1P06400 MIR1271-201ENST00000408537 86 ntBASIC4.68□□□□□ -1.66
RB1P06400 NRBF2P2-201ENST00000413087 861 ntBASIC4.68□□□□□ -1.66
RB1P06400 USP9YP21-201ENST00000420603 432 ntBASIC4.68□□□□□ -1.66
RB1P06400 AL031736.2-201ENST00000426573 787 ntBASIC4.68□□□□□ -1.66
RB1P06400 RPL7P2-201ENST00000427639 268 ntBASIC4.68□□□□□ -1.66
RB1P06400 AC007389.2-201ENST00000434630 306 ntBASIC4.68□□□□□ -1.66
RB1P06400 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RB1P06400 AL358232.1-201ENST00000448030 501 ntBASIC4.68□□□□□ -1.66
RB1P06400 AL591473.1-201ENST00000464297 313 ntBASIC4.68□□□□□ -1.66
RB1P06400 AC010683.1-201ENST00000473673 378 ntBASIC4.68□□□□□ -1.66
RB1P06400 AC023050.1-201ENST00000498198 304 ntBASIC4.68□□□□□ -1.66
RB1P06400 PRELID3BP6-201ENST00000503839 571 ntBASIC4.68□□□□□ -1.66
RB1P06400 AL592156.1-201ENST00000508758 304 ntBASIC4.68□□□□□ -1.66
RB1P06400 KCTD9P2-201ENST00000512203 1013 ntBASIC4.68□□□□□ -1.66
RB1P06400 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.68□□□□□ -1.66
RB1P06400 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.68□□□□□ -1.66
RB1P06400 AC105233.3-201ENST00000531125 744 ntBASIC4.68□□□□□ -1.66
RB1P06400 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.68□□□□□ -1.66
RB1P06400 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.68□□□□□ -1.66
RB1P06400 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.68□□□□□ -1.66
RB1P06400 AC053481.4-201ENST00000583164 216 ntBASIC4.68□□□□□ -1.66
RB1P06400 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.68□□□□□ -1.66
RB1P06400 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.68□□□□□ -1.66
RB1P06400 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.68□□□□□ -1.66
RB1P06400 AL022067.1-201ENST00000602426 454 ntBASIC4.68□□□□□ -1.66
RB1P06400 AL161729.3-201ENST00000603533 673 ntBASIC4.68□□□□□ -1.66
RB1P06400 AC069431.2-201ENST00000604149 1099 ntBASIC4.68□□□□□ -1.66
RB1P06400 AL451086.1-201ENST00000605596 223 ntBASIC4.68□□□□□ -1.66
RB1P06400 RNU4-89P-201ENST00000607443 133 ntBASIC4.68□□□□□ -1.66
RB1P06400 AP000240.1-201ENST00000609910 452 ntBASIC4.68□□□□□ -1.66
RB1P06400 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.68□□□□□ -1.66
RB1P06400 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.68□□□□□ -1.66
RB1P06400 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RB1P06400 CASC19-206ENST00000641028 1430 ntBASIC4.68□□□□□ -1.66
RB1P06400 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RB1P06400 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RB1P06400 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms