Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.13□□□□□ -2.07
APOBP04114 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.13□□□□□ -2.07
APOBP04114 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.13□□□□□ -2.07
APOBP04114 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.13□□□□□ -2.07
APOBP04114 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.13□□□□□ -2.07
APOBP04114 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
APOBP04114 AL365361.1-201ENST00000566942 3481 ntBASIC2.13□□□□□ -2.07
APOBP04114 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
APOBP04114 A2MP1-204ENST00000566278 4130 ntBASIC2.13□□□□□ -2.07
APOBP04114 RN7SKP111-201ENST00000410349 271 ntBASIC2.13□□□□□ -2.07
APOBP04114 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.13□□□□□ -2.07
APOBP04114 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.13□□□□□ -2.07
APOBP04114 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.13□□□□□ -2.07
APOBP04114 AL513175.1-201ENST00000431492 780 ntBASIC2.13□□□□□ -2.07
APOBP04114 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.13□□□□□ -2.07
APOBP04114 RPL21P6-201ENST00000479171 504 ntBASIC2.13□□□□□ -2.07
APOBP04114 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.13□□□□□ -2.07
APOBP04114 OR4C2P-201ENST00000530855 1064 ntBASIC2.13□□□□□ -2.07
APOBP04114 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.13□□□□□ -2.07
APOBP04114 MTND6P33-201ENST00000571794 183 ntBASIC2.13□□□□□ -2.07
APOBP04114 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.13□□□□□ -2.07
APOBP04114 AC127502.3-201ENST00000636170 1206 ntBASIC2.13□□□□□ -2.07
APOBP04114 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
APOBP04114 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
APOBP04114 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
APOBP04114 Y_RNA.238-201ENST00000364441 102 ntBASIC2.13□□□□□ -2.07
APOBP04114 RNA5SP235-201ENST00000365411 114 ntBASIC2.13□□□□□ -2.07
APOBP04114 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 AC009963.1-201ENST00000417265 157 ntBASIC2.13□□□□□ -2.07
APOBP04114 ZYG11AP1-201ENST00000430329 837 ntBASIC2.13□□□□□ -2.07
APOBP04114 AF228730.2-201ENST00000438784 848 ntBASIC2.13□□□□□ -2.07
APOBP04114 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.13□□□□□ -2.07
APOBP04114 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.13□□□□□ -2.07
APOBP04114 AC109329.2-201ENST00000519658 482 ntBASIC2.13□□□□□ -2.07
APOBP04114 AP006245.1-201ENST00000522549 120 ntBASIC2.13□□□□□ -2.07
APOBP04114 GTF3AP2-201ENST00000557014 266 ntBASIC2.13□□□□□ -2.07
APOBP04114 AC139713.2-210ENST00000641741 992 ntBASIC2.13□□□□□ -2.07
APOBP04114 AC006484.1-201ENST00000435086 1884 ntBASIC2.13□□□□□ -2.07
APOBP04114 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
APOBP04114 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
APOBP04114 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
APOBP04114 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBP04114 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 MAPK10-286ENST00000641208 8747 ntBASIC2.12□□□□□ -2.07
APOBP04114 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 OR5AW1P-201ENST00000426334 1006 ntBASIC2.12□□□□□ -2.07
APOBP04114 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.12□□□□□ -2.07
APOBP04114 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBP04114 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.12□□□□□ -2.07
APOBP04114 AC023598.1-201ENST00000472521 361 ntBASIC2.12□□□□□ -2.07
APOBP04114 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.12□□□□□ -2.07
APOBP04114 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 DDX18P4-201ENST00000511690 1966 ntBASIC2.12□□□□□ -2.07
APOBP04114 Z95114.1-201ENST00000624264 14574 ntBASIC2.12□□□□□ -2.07
APOBP04114 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 RNU6-7-201ENST00000364784 107 ntBASIC2.12□□□□□ -2.07
APOBP04114 RNU6-8-201ENST00000365467 107 ntBASIC2.12□□□□□ -2.07
APOBP04114 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 AC140076.1-201ENST00000449897 361 ntBASIC2.12□□□□□ -2.07
APOBP04114 AC109925.1-201ENST00000478069 331 ntBASIC2.12□□□□□ -2.07
APOBP04114 AC012123.2-201ENST00000485809 248 ntBASIC2.12□□□□□ -2.07
APOBP04114 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.12□□□□□ -2.07
APOBP04114 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBP04114 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.12□□□□□ -2.07
APOBP04114 AL157394.1-201ENST00000562983 1224 ntBASIC2.12□□□□□ -2.07
APOBP04114 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.12□□□□□ -2.07
APOBP04114 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBP04114 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.12□□□□□ -2.07
APOBP04114 PCA3_2.1-201ENST00000612507 409 ntBASIC2.12□□□□□ -2.07
APOBP04114 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 AC239809.1-201ENST00000450470 217 ntBASIC2.12□□□□□ -2.07
APOBP04114 S100A11P1-201ENST00000477525 312 ntBASIC2.12□□□□□ -2.07
APOBP04114 AC006363.1-201ENST00000603806 463 ntBASIC2.12□□□□□ -2.07
APOBP04114 OR7M1P-201ENST00000608946 533 ntBASIC2.12□□□□□ -2.07
APOBP04114 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOBP04114 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.11□□□□□ -2.07
APOBP04114 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 TCP1P3-201ENST00000414406 1498 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms