Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PDGFBP01127 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFBP01127 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFBP01127 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 AC100778.3-201ENST00000580060 1750 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFBP01127 RNU6-252P-201ENST00000363232 107 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 SNORA5A-201ENST00000384111 134 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 U8.11-201ENST00000384699 133 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 U8.12-201ENST00000384701 133 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 MIR30B-201ENST00000384850 88 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDGFBP01127 RNU2-6P-201ENST00000411404 190 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFBP01127 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 AL691449.1-201ENST00000426570 421 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFBP01127 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFBP01127 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 ARL5AP2-201ENST00000444698 533 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 YWHAQP9-201ENST00000445891 512 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 PDSS1P2-201ENST00000449397 678 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 NDUFS5P3-201ENST00000450668 321 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFBP01127 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFBP01127 U8.18-201ENST00000459285 133 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFBP01127 RPL7P22-201ENST00000466005 733 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFBP01127 S100A11P1-201ENST00000477525 312 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFBP01127 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFBP01127 MTATP6P22-201ENST00000507369 598 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AC074250.1-201ENST00000511117 192 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 RNU1-95P-201ENST00000516357 160 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 RNU1-128P-201ENST00000516704 160 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFBP01127 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFBP01127 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFBP01127 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFBP01127 RPL21P12-201ENST00000559810 515 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AC090312.2-201ENST00000582687 378 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.28□□□□□ -1.72
PDGFBP01127 AL671309.1-201ENST00000603750 544 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 KATNBL1P5-201ENST00000605015 517 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AC010680.4-201ENST00000605334 543 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFBP01127 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFBP01127 AL445493.3-201ENST00000619568 477 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AP000648.2-201ENST00000624182 404 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AP000720.1-201ENST00000625091 483 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 AC008013.2-202ENST00000637965 364 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFBP01127 AC138393.1-206ENST00000540997 1886 ntBASIC4.28□□□□□ -1.72
PDGFBP01127 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFBP01127 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PDGFBP01127 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PDGFBP01127 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFBP01127 AL133412.1-201ENST00000380194 2992 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFBP01127 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
PDGFBP01127 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFBP01127 OR4A15-201ENST00000314706 1035 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 RNU6-650P-201ENST00000365658 111 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PDGFBP01127 RNU6-213P-201ENST00000384051 104 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 MIR183-201ENST00000384958 110 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 FCF1P5-201ENST00000406490 482 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 MTATP6P31-201ENST00000406985 692 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 RN7SKP156-201ENST00000410308 342 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AC092647.1-201ENST00000420654 287 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AC104333.2-201ENST00000422630 192 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AL121882.1-201ENST00000422893 417 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFBP01127 AC104651.2-201ENST00000447549 528 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.27□□□□□ -1.73
PDGFBP01127 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFBP01127 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFBP01127 AL139099.1-201ENST00000497398 403 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFBP01127 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.27□□□□□ -1.73
PDGFBP01127 AC113430.1-201ENST00000506872 718 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFBP01127 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.27□□□□□ -1.73
PDGFBP01127 OR5AK3P-201ENST00000527486 1297 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFBP01127 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFBP01127 GTF2IP22-201ENST00000554443 182 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.27□□□□□ -1.73
PDGFBP01127 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFBP01127 NTAN1P1-201ENST00000603150 646 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 AC005776.1-201ENST00000603164 290 ntBASIC4.27□□□□□ -1.73
PDGFBP01127 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFBP01127 FRG1DP-201ENST00000635586 771 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms