Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 SS18L2P2-201ENST00000583960 235 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 BNIP3P38-201ENST00000601117 544 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 AC005972.3-201ENST00000606304 481 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 AC022893.2-201ENST00000564832 3296 ntBASIC4.09□□□□□ -1.76
CTDNEP1O95476 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CTDNEP1O95476 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CTDNEP1O95476 AC090337.1-201ENST00000579651 2074 ntBASIC4.09□□□□□ -1.76
CTDNEP1O95476 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CTDNEP1O95476 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CTDNEP1O95476 MAPK10-373ENST00000641983 6772 ntBASIC4.09□□□□□ -1.76
CTDNEP1O95476 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.09□□□□□ -1.76
CTDNEP1O95476 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTDNEP1O95476 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTDNEP1O95476 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTDNEP1O95476 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTDNEP1O95476 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 SNORA73.2-201ENST00000364946 201 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 AL356317.1-201ENST00000396110 1436 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 AL158073.1-201ENST00000426848 1104 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 CYCSP4-201ENST00000429682 331 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTDNEP1O95476 RPS4XP2-201ENST00000458402 793 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 AC091917.2-201ENST00000505002 744 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 AC021146.1-201ENST00000511202 716 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 RN7SKP13-201ENST00000515933 244 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 MIR2276-201ENST00000516886 89 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTDNEP1O95476 TRAV11-201ENST00000539512 339 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 MTND2P13-201ENST00000577438 1039 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 AL731566.2-201ENST00000618971 317 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 AC012020.1-201ENST00000624541 1728 ntBASIC4.08□□□□□ -1.76
CTDNEP1O95476 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CTDNEP1O95476 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTDNEP1O95476 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTDNEP1O95476 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC058791.1-201ENST00000608412 3198 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTDNEP1O95476 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTDNEP1O95476 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTDNEP1O95476 MIR30E-201ENST00000362104 92 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 SNORA5A-201ENST00000384111 134 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AL158071.1-201ENST00000430315 461 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 ATP5JP1-201ENST00000431631 322 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC022336.1-201ENST00000475510 337 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC104619.4-201ENST00000510773 249 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 RNU2-27P-201ENST00000516185 142 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 NDUFB9P3-201ENST00000521269 501 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC006130.2-201ENST00000586202 326 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC004241.3-201ENST00000611728 517 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AP003400.2-201ENST00000624036 666 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC012442.3-202ENST00000636742 206 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CTDNEP1O95476 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTDNEP1O95476 AC007390.2-201ENST00000606229 3803 ntBASIC4.07□□□□□ -1.76
CTDNEP1O95476 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTDNEP1O95476 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 RPL36AP36-201ENST00000418616 301 ntBASIC4.06□□□□□ -1.76
CTDNEP1O95476 AC099336.2-201ENST00000422457 254 ntBASIC4.06□□□□□ -1.76
CTDNEP1O95476 AL035246.1-201ENST00000433554 1255 ntBASIC4.06□□□□□ -1.76
CTDNEP1O95476 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.06□□□□□ -1.76
CTDNEP1O95476 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms