Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.36□□□□□ -1.39
GRIN3BO60391 RPS3AP4-201ENST00000555161 764 ntBASIC6.36□□□□□ -1.39
GRIN3BO60391 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GRIN3BO60391 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIN3BO60391 MIR4528-201ENST00000577763 90 ntBASIC6.36□□□□□ -1.39
GRIN3BO60391 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.36□□□□□ -1.39
GRIN3BO60391 AC015871.2-201ENST00000603605 948 ntBASIC6.36□□□□□ -1.39
GRIN3BO60391 AL022154.1-201ENST00000604698 785 ntBASIC6.36□□□□□ -1.39
GRIN3BO60391 OR8G7P-201ENST00000616658 848 ntBASIC6.36□□□□□ -1.39
GRIN3BO60391 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
GRIN3BO60391 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
GRIN3BO60391 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GRIN3BO60391 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GRIN3BO60391 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
GRIN3BO60391 SAMMSON-226ENST00000642089 1582 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
GRIN3BO60391 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
GRIN3BO60391 AC100757.1-201ENST00000616872 1835 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
GRIN3BO60391 AC104297.1-201ENST00000393779 870 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 RPL32P23-201ENST00000397237 405 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 AC096921.1-201ENST00000411661 375 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 AC234781.4-201ENST00000419384 244 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.35□□□□□ -1.39
GRIN3BO60391 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC6.35□□□□□ -1.39
GRIN3BO60391 EEF1E1P1-201ENST00000446998 430 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.35□□□□□ -1.39
GRIN3BO60391 OR52A4P-201ENST00000472867 958 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 AC023424.1-201ENST00000496058 459 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 PGBD4P4-201ENST00000509673 613 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 MTCO1P30-201ENST00000515244 580 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.35□□□□□ -1.39
GRIN3BO60391 AC118273.2-201ENST00000532092 465 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.35□□□□□ -1.39
GRIN3BO60391 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.35□□□□□ -1.39
GRIN3BO60391 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.35□□□□□ -1.39
GRIN3BO60391 AC010487.1-201ENST00000594408 1172 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 AC005191.1-201ENST00000603950 358 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 AC025253.1-201ENST00000613623 543 ntBASIC6.35□□□□□ -1.39
GRIN3BO60391 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
GRIN3BO60391 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
GRIN3BO60391 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
GRIN3BO60391 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
GRIN3BO60391 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GRIN3BO60391 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.34□□□□□ -1.39
GRIN3BO60391 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.34□□□□□ -1.39
GRIN3BO60391 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.34□□□□□ -1.39
GRIN3BO60391 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
GRIN3BO60391 RNA5SP447-201ENST00000363749 119 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 MIR129-1-201ENST00000384972 72 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 SNORA11.1-201ENST00000408133 129 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 RPL17P12-201ENST00000413391 526 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 RPSAP35-201ENST00000413753 818 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 BX510359.2-201ENST00000417920 305 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AC062016.2-201ENST00000420950 676 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GRIN3BO60391 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 CYCSP11-201ENST00000436426 315 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.34□□□□□ -1.39
GRIN3BO60391 ARPC3P2-201ENST00000457786 533 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 AC079168.1-201ENST00000458741 345 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.34□□□□□ -1.39
GRIN3BO60391 AC109327.1-201ENST00000471666 403 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 RPL12P20-201ENST00000475538 479 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 OR4G11P-201ENST00000492842 939 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 AC108078.3-201ENST00000502633 489 ntBASIC6.34□□□□□ -1.39
GRIN3BO60391 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms