Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MIR448-201ENST00000362131 111 ntBASIC4.2□□□□□ -1.74
SSX4O60224 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 MIR513A2-201ENST00000385249 127 ntBASIC4.2□□□□□ -1.74
SSX4O60224 GLULP6-201ENST00000399502 913 ntBASIC4.2□□□□□ -1.74
SSX4O60224 MIR298-201ENST00000401212 88 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AL080315.1-201ENST00000406055 466 ntBASIC4.2□□□□□ -1.74
SSX4O60224 SNORA77-201ENST00000408716 125 ntBASIC4.2□□□□□ -1.74
SSX4O60224 RPS3AP25-201ENST00000411660 793 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AC004022.2-201ENST00000413824 193 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AC004074.1-201ENST00000421810 1063 ntBASIC4.2□□□□□ -1.74
SSX4O60224 MTCO1P3-201ENST00000429327 192 ntBASIC4.2□□□□□ -1.74
SSX4O60224 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX4O60224 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.2□□□□□ -1.74
SSX4O60224 YWHAZP8-201ENST00000436935 731 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AC105402.2-201ENST00000438503 358 ntBASIC4.2□□□□□ -1.74
SSX4O60224 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX4O60224 VN1R25P-201ENST00000443385 738 ntBASIC4.2□□□□□ -1.74
SSX4O60224 HMGB1P16-201ENST00000447155 540 ntBASIC4.2□□□□□ -1.74
SSX4O60224 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX4O60224 SLC25A18P1-201ENST00000449385 454 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AC234781.3-201ENST00000452540 973 ntBASIC4.2□□□□□ -1.74
SSX4O60224 RN7SL41P-201ENST00000476144 297 ntBASIC4.2□□□□□ -1.74
SSX4O60224 RPL23AP44-201ENST00000482216 473 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AC084024.2-201ENST00000503480 791 ntBASIC4.2□□□□□ -1.74
SSX4O60224 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX4O60224 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.2□□□□□ -1.74
SSX4O60224 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX4O60224 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX4O60224 AC100770.1-201ENST00000532310 322 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AP001880.2-201ENST00000538233 448 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX4O60224 AC015688.2-201ENST00000584523 262 ntBASIC4.2□□□□□ -1.74
SSX4O60224 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX4O60224 AC020910.3-201ENST00000603701 874 ntBASIC4.2□□□□□ -1.74
SSX4O60224 AL391358.1-201ENST00000605342 190 ntBASIC4.2□□□□□ -1.74
SSX4O60224 MIR6780A-201ENST00000615089 68 ntBASIC4.2□□□□□ -1.74
SSX4O60224 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX4O60224 AC006386.1-201ENST00000619436 415 ntBASIC4.2□□□□□ -1.74
SSX4O60224 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX4O60224 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX4O60224 AC007529.1-201ENST00000418574 2178 ntBASIC4.2□□□□□ -1.74
SSX4O60224 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX4O60224 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SSX4O60224 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX4O60224 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX4O60224 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
SSX4O60224 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 AL445487.1-201ENST00000415694 1580 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC027290.2-201ENST00000623210 18662 ntBASIC4.19□□□□□ -1.74
SSX4O60224 XPOTP1-201ENST00000443317 2398 ntBASIC4.19□□□□□ -1.74
SSX4O60224 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX4O60224 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 HMGB1P5-201ENST00000255320 642 ntBASIC4.19□□□□□ -1.74
SSX4O60224 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 snoZ40.1-201ENST00000364540 72 ntBASIC4.19□□□□□ -1.74
SSX4O60224 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX4O60224 RNU6-1293P-201ENST00000384077 107 ntBASIC4.19□□□□□ -1.74
SSX4O60224 MIR93-201ENST00000385024 80 ntBASIC4.19□□□□□ -1.74
SSX4O60224 SNORA40.2-201ENST00000390847 128 ntBASIC4.19□□□□□ -1.74
SSX4O60224 FABP12P1-201ENST00000401911 322 ntBASIC4.19□□□□□ -1.74
SSX4O60224 HSPD1P16-201ENST00000402302 394 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AL513175.2-201ENST00000422071 443 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX4O60224 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX4O60224 AC092162.1-201ENST00000432828 434 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX4O60224 COX6CP18-201ENST00000448769 222 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC010733.1-201ENST00000451515 401 ntBASIC4.19□□□□□ -1.74
SSX4O60224 HMGB3P21-201ENST00000452483 547 ntBASIC4.19□□□□□ -1.74
SSX4O60224 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX4O60224 RPS15AP1-201ENST00000457423 391 ntBASIC4.19□□□□□ -1.74
SSX4O60224 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SSX4O60224 AC005410.1-202ENST00000460347 485 ntBASIC4.19□□□□□ -1.74
SSX4O60224 FTH1P2-201ENST00000466086 412 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX4O60224 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SSX4O60224 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX4O60224 MTATP6P22-201ENST00000507369 598 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX4O60224 HMGB3P13-201ENST00000511263 607 ntBASIC4.19□□□□□ -1.74
SSX4O60224 RN7SKP276-201ENST00000516242 268 ntBASIC4.19□□□□□ -1.74
SSX4O60224 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX4O60224 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX4O60224 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX4O60224 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX4O60224 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
SSX4O60224 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.19□□□□□ -1.74
SSX4O60224 AC084757.1-201ENST00000559987 490 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC015912.2-201ENST00000571053 181 ntBASIC4.19□□□□□ -1.74
SSX4O60224 TVP23CP2-201ENST00000571473 623 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AL121834.1-201ENST00000572284 509 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC068790.4-201ENST00000602474 263 ntBASIC4.19□□□□□ -1.74
SSX4O60224 MTND3P19-201ENST00000603825 345 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AP003973.1-201ENST00000604639 691 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms