Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL359715.4-201ENST00000606629 1436 ntBASIC4.21□□□□□ -1.73
MSH4O15457 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
MSH4O15457 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
MSH4O15457 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.21□□□□□ -1.73
MSH4O15457 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
MSH4O15457 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.21□□□□□ -1.74
MSH4O15457 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MSH4O15457 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
MSH4O15457 OR10J6P-201ENST00000289731 930 ntBASIC4.21□□□□□ -1.74
MSH4O15457 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
MSH4O15457 RNA5SP424-201ENST00000390988 115 ntBASIC4.21□□□□□ -1.74
MSH4O15457 RNA5SP39-201ENST00000411245 120 ntBASIC4.21□□□□□ -1.74
MSH4O15457 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.21□□□□□ -1.74
MSH4O15457 AC048351.1-201ENST00000420064 602 ntBASIC4.21□□□□□ -1.74
MSH4O15457 AC099336.2-201ENST00000422457 254 ntBASIC4.21□□□□□ -1.74
MSH4O15457 AL391219.1-201ENST00000422570 483 ntBASIC4.21□□□□□ -1.74
MSH4O15457 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.21□□□□□ -1.74
MSH4O15457 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.21□□□□□ -1.74
MSH4O15457 AL133547.1-201ENST00000448546 220 ntBASIC4.21□□□□□ -1.74
MSH4O15457 AC098824.1-201ENST00000453565 980 ntBASIC4.21□□□□□ -1.74
MSH4O15457 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.21□□□□□ -1.74
MSH4O15457 AC099560.2-201ENST00000457554 255 ntBASIC4.21□□□□□ -1.74
MSH4O15457 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.21□□□□□ -1.74
MSH4O15457 AC022034.3-201ENST00000471393 478 ntBASIC4.21□□□□□ -1.74
MSH4O15457 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.21□□□□□ -1.74
MSH4O15457 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.21□□□□□ -1.74
MSH4O15457 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.21□□□□□ -1.74
MSH4O15457 GTF2IP22-201ENST00000554443 182 ntBASIC4.21□□□□□ -1.74
MSH4O15457 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.21□□□□□ -1.74
MSH4O15457 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.21□□□□□ -1.74
MSH4O15457 MIR3158-1-201ENST00000583596 81 ntBASIC4.21□□□□□ -1.74
MSH4O15457 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.21□□□□□ -1.74
MSH4O15457 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.21□□□□□ -1.74
MSH4O15457 AC034229.5-201ENST00000624258 185 ntBASIC4.21□□□□□ -1.74
MSH4O15457 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
MSH4O15457 ZNF285B-201ENST00000561698 1767 ntBASIC4.21□□□□□ -1.74
MSH4O15457 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MSH4O15457 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MSH4O15457 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
MSH4O15457 PHKBP1-201ENST00000450951 1951 ntBASIC4.2□□□□□ -1.74
MSH4O15457 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.2□□□□□ -1.74
MSH4O15457 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 SNORA73.2-201ENST00000364946 201 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AL512430.2-201ENST00000406786 339 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.2□□□□□ -1.74
MSH4O15457 DPY19L1P2-201ENST00000426647 915 ntBASIC4.2□□□□□ -1.74
MSH4O15457 HIGD1AP12-201ENST00000427832 281 ntBASIC4.2□□□□□ -1.74
MSH4O15457 MTCO3P21-201ENST00000430791 643 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.2□□□□□ -1.74
MSH4O15457 MTND6P18-201ENST00000439477 513 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AL645931.1-201ENST00000439737 410 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AL356535.1-201ENST00000440335 398 ntBASIC4.2□□□□□ -1.74
MSH4O15457 YWHAQP9-201ENST00000445891 512 ntBASIC4.2□□□□□ -1.74
MSH4O15457 Z95327.1-201ENST00000446082 482 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC006480.1-201ENST00000449887 378 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
MSH4O15457 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.2□□□□□ -1.74
MSH4O15457 HMGB3P13-201ENST00000511263 607 ntBASIC4.2□□□□□ -1.74
MSH4O15457 RNU1-95P-201ENST00000516357 160 ntBASIC4.2□□□□□ -1.74
MSH4O15457 RNU1-128P-201ENST00000516704 160 ntBASIC4.2□□□□□ -1.74
MSH4O15457 HMGB1P46-201ENST00000520062 610 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC006960.3-201ENST00000561845 705 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.2□□□□□ -1.74
MSH4O15457 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.2□□□□□ -1.74
MSH4O15457 AC022884.3-201ENST00000579571 248 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC005972.3-201ENST00000606304 481 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AL391497.1-201ENST00000608671 547 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC006133.1-201ENST00000617106 264 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC131238.1-201ENST00000617135 328 ntBASIC4.2□□□□□ -1.74
MSH4O15457 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.2□□□□□ -1.74
MSH4O15457 AC015908.5-201ENST00000623289 343 ntBASIC4.2□□□□□ -1.74
MSH4O15457 AC020978.9-201ENST00000624380 1141 ntBASIC4.2□□□□□ -1.74
MSH4O15457 MAPK10-372ENST00000641954 3413 ntBASIC4.2□□□□□ -1.74
MSH4O15457 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
MSH4O15457 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.2□□□□□ -1.74
MSH4O15457 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.2□□□□□ -1.74
MSH4O15457 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
MSH4O15457 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MSH4O15457 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MSH4O15457 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MSH4O15457 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.19□□□□□ -1.74
MSH4O15457 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MSH4O15457 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
MSH4O15457 RNA5SP51-201ENST00000364750 119 ntBASIC4.19□□□□□ -1.74
MSH4O15457 SNORA48.7-201ENST00000391302 135 ntBASIC4.19□□□□□ -1.74
MSH4O15457 RPL21P17-201ENST00000397467 475 ntBASIC4.19□□□□□ -1.74
MSH4O15457 MTND3P20-201ENST00000407663 186 ntBASIC4.19□□□□□ -1.74
MSH4O15457 SYF2P2-201ENST00000417620 583 ntBASIC4.19□□□□□ -1.74
MSH4O15457 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MSH4O15457 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.19□□□□□ -1.74
MSH4O15457 RPS26P47-201ENST00000427219 348 ntBASIC4.19□□□□□ -1.74
MSH4O15457 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MSH4O15457 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms