Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNA5SP105-201ENST00000391123 113 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.06□□□□□ -1.92
SDCBPO00560 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.06□□□□□ -1.92
SDCBPO00560 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.06□□□□□ -1.92
SDCBPO00560 AC096644.3-201ENST00000416788 338 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.06□□□□□ -1.92
SDCBPO00560 AL591419.1-201ENST00000427423 339 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.06□□□□□ -1.92
SDCBPO00560 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.06□□□□□ -1.92
SDCBPO00560 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.06□□□□□ -1.92
SDCBPO00560 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 AP002371.1-201ENST00000463604 433 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 GAPDHP36-201ENST00000480688 918 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.06□□□□□ -1.92
SDCBPO00560 ACTG1P13-201ENST00000486987 1043 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 AC100871.1-201ENST00000507871 1456 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.06□□□□□ -1.92
SDCBPO00560 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
SDCBPO00560 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 OR7E13P-201ENST00000526052 910 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.06□□□□□ -1.92
SDCBPO00560 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.06□□□□□ -1.92
SDCBPO00560 TGIF1P1-201ENST00000558095 802 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.06□□□□□ -1.92
SDCBPO00560 AC090953.1-201ENST00000604305 1092 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.06□□□□□ -1.92
SDCBPO00560 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
SDCBPO00560 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SDCBPO00560 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SDCBPO00560 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 MFSD8-236ENST00000641509 4050 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 ASNSP1-204ENST00000641977 1664 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 RIOK3P1-201ENST00000418778 1528 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.05□□□□□ -1.92
SDCBPO00560 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SDCBPO00560 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.05□□□□□ -1.92
SDCBPO00560 OR4A15-201ENST00000314706 1035 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 RN7SKP227-201ENST00000364445 330 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.05□□□□□ -1.92
SDCBPO00560 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
SDCBPO00560 RPL32P23-201ENST00000397237 405 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.05□□□□□ -1.92
SDCBPO00560 RAB28P1-201ENST00000411517 641 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.05□□□□□ -1.92
SDCBPO00560 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.05□□□□□ -1.92
SDCBPO00560 AL139247.1-201ENST00000422768 325 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 AC017083.1-201ENST00000428093 483 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 AC004975.1-201ENST00000428733 208 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.05□□□□□ -1.92
SDCBPO00560 FTH1P6-201ENST00000430768 320 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 MRPS18BP2-201ENST00000434310 759 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 RPS29P7-201ENST00000439662 171 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.05□□□□□ -1.92
SDCBPO00560 AC010655.1-201ENST00000449336 292 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 RNU7-170P-201ENST00000459303 61 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 RPL7L1P8-201ENST00000469911 741 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.05□□□□□ -1.92
SDCBPO00560 AC084357.1-201ENST00000473404 255 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.05□□□□□ -1.92
SDCBPO00560 HMGB3P14-201ENST00000494195 599 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.05□□□□□ -1.92
SDCBPO00560 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 RN7SKP141-201ENST00000516167 338 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 SCARNA14-201ENST00000516903 136 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 RN7SKP60-201ENST00000516985 239 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.05□□□□□ -1.92
SDCBPO00560 AL139174.1-201ENST00000531489 886 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 TOMM20P2-201ENST00000540082 421 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.05□□□□□ -1.92
SDCBPO00560 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.05□□□□□ -1.92
SDCBPO00560 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.05□□□□□ -1.92
SDCBPO00560 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 BNIP3P38-201ENST00000601117 544 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.05□□□□□ -1.92
SDCBPO00560 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.05□□□□□ -1.92
SDCBPO00560 AP000553.6-201ENST00000641242 118 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SDCBPO00560 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.05□□□□□ -1.92
SDCBPO00560 AC114546.3-201ENST00000623582 1734 ntBASIC3.05□□□□□ -1.92
SDCBPO00560 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SDCBPO00560 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SDCBPO00560 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
SDCBPO00560 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
SDCBPO00560 XIAPP3-201ENST00000312918 795 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms