Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.53□□□□□ -1.84
UPK1AO00322 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 CYCSP30-201ENST00000546447 172 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 RN7SL703P-201ENST00000578485 302 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 MIR4286-201ENST00000580651 93 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK1AO00322 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UPK1AO00322 KLKP1-201ENST00000595979 403 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 AC067959.1-201ENST00000604334 379 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.53□□□□□ -1.84
UPK1AO00322 AC107905.1-201ENST00000616204 426 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 AL354798.1-201ENST00000622505 329 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
UPK1AO00322 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPK1AO00322 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPK1AO00322 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UPK1AO00322 AC007529.1-201ENST00000418574 2178 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPK1AO00322 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
UPK1AO00322 SPATA2P1-201ENST00000431223 2055 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 PRO1804-201ENST00000623780 2050 ntBASIC3.53□□□□□ -1.84
UPK1AO00322 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
UPK1AO00322 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.52□□□□□ -1.85
UPK1AO00322 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
UPK1AO00322 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UPK1AO00322 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UPK1AO00322 RNU6-618P-201ENST00000363518 112 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 RNU1-87P-201ENST00000363727 170 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 SNORA62.2-201ENST00000364672 152 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.52□□□□□ -1.85
UPK1AO00322 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 RNU6-146P-201ENST00000384602 108 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
UPK1AO00322 AC240504.1-201ENST00000395709 845 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 AL691447.1-201ENST00000419456 387 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 HIGD1AP12-201ENST00000427832 281 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 ARL5AP3-201ENST00000439327 386 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.52□□□□□ -1.85
UPK1AO00322 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.52□□□□□ -1.85
UPK1AO00322 RPL5P13-201ENST00000462840 709 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 RPS3AP50-201ENST00000487064 803 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.52□□□□□ -1.85
UPK1AO00322 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.52□□□□□ -1.85
UPK1AO00322 MIR4697-201ENST00000582977 78 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.52□□□□□ -1.85
UPK1AO00322 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK1AO00322 AL592295.2-201ENST00000612578 206 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 AL391261.4-201ENST00000616012 481 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 AC068724.3-201ENST00000625906 87 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 CEP170P1-201ENST00000502249 4587 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
UPK1AO00322 AL133412.1-201ENST00000380194 2992 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 PHKBP1-201ENST00000450951 1951 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 MFSD8-220ENST00000641243 1422 ntBASIC3.52□□□□□ -1.85
UPK1AO00322 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.52□□□□□ -1.85
UPK1AO00322 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UPK1AO00322 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK1AO00322 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK1AO00322 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
UPK1AO00322 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK1AO00322 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 AC114546.3-201ENST00000623582 1734 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK1AO00322 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
UPK1AO00322 MIR30B-201ENST00000384850 88 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 MIR1183-201ENST00000408856 89 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.51□□□□□ -1.85
UPK1AO00322 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 AL390879.2-203ENST00000426943 1121 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.51□□□□□ -1.85
UPK1AO00322 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.51□□□□□ -1.85
UPK1AO00322 VN1R48P-201ENST00000448149 1036 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AC006480.1-201ENST00000449887 378 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 UBDP1-202ENST00000457888 382 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 NPM1P17-201ENST00000479221 602 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AL139099.1-201ENST00000497398 403 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AC068305.1-201ENST00000497406 726 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.51□□□□□ -1.85
UPK1AO00322 USP9YP5-201ENST00000511770 630 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 ARL2BPP6-201ENST00000512757 439 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 FTH1P9-201ENST00000513251 355 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 RN7SKP21-201ENST00000516503 220 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.51□□□□□ -1.85
UPK1AO00322 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.51□□□□□ -1.85
UPK1AO00322 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.51□□□□□ -1.85
UPK1AO00322 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UPK1AO00322 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 MIR4425-201ENST00000580572 84 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms