Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC018754.1-201ENST00000607486 925 ntBASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 AC023043.4-201ENST00000612081 449 ntBASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 AL158196.1-201ENST00000616786 434 ntBASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 AC084824.4-201ENST00000620106 731 ntBASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 AC068724.3-201ENST00000625906 87 ntBASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 AL133243.3-201ENST00000617415 3004 ntBASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPIPA3F8WFD2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RNU1-130P-201ENST00000363930 160 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RNA5SP479-201ENST00000364858 117 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RNU6-549P-201ENST00000384433 107 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AL121834.1-202ENST00000404494 277 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC023347.2-201ENST00000433994 462 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RPS3AP54-201ENST00000435535 734 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RPL23AP43-201ENST00000446445 471 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC012671.1-201ENST00000451912 203 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC244505.3-201ENST00000454598 187 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RN7SL98P-201ENST00000462271 300 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 PRELID3BP6-201ENST00000503839 571 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC110792.2-201ENST00000510278 224 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RNA5SP497-201ENST00000516081 97 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC022790.1-201ENST00000522872 204 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AF279873.1-201ENST00000523393 313 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 CYCSP28-201ENST00000534284 321 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 PSMB7P1-201ENST00000556349 514 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 BPIFA4P-203ENST00000603168 689 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RPAP2P1-201ENST00000603626 1168 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 SNORD91B-202ENST00000608459 222 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC093673.2-201ENST00000609674 331 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC068831.8-201ENST00000620171 435 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC000123.2-201ENST00000623124 461 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 NXPH1-205ENST00000602349 1953 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC007529.1-201ENST00000418574 2178 ntBASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.03□□□□□ -1.76
NPIPA3F8WFD2 AC111188.2-201ENST00000529697 1387 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 AC007390.2-201ENST00000606229 3803 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 AL049555.1-201ENST00000562834 1933 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 UBBP2-201ENST00000376781 231 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 RNU1-63P-201ENST00000383902 164 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 LAP3P1-201ENST00000403648 294 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 RPL23AP48-201ENST00000406913 488 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 RN7SKP199-201ENST00000410325 305 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 CEACAMP8-201ENST00000413902 580 ntBASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.02□□□□□ -1.77
NPIPA3F8WFD2 RAD23BP1-201ENST00000421404 1227 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms