Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 TPTE2P6-202ENST00000445572 1007 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 HMGN2P21-201ENST00000447764 270 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 TVP23BP2-201ENST00000455082 615 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 NDUFA12P1-201ENST00000455914 406 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 HMGB3P30-201ENST00000457863 606 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC010468.1-201ENST00000461022 817 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC006463.2-201ENST00000473326 348 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 TRBV12-2-201ENST00000489763 344 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC011005.3-201ENST00000491624 395 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC090543.1-201ENST00000492168 485 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC111193.1-201ENST00000504097 155 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC093824.1-201ENST00000508796 343 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 RNU6-889P-201ENST00000517189 103 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC008802.1-201ENST00000519121 791 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AP001781.1-201ENST00000530977 207 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 PDCL2P2-201ENST00000533651 189 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 POLR2KP1-201ENST00000553226 168 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC009032.1-201ENST00000617574 431 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 uc_338.13-201ENST00000618243 179 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC007342.9-201ENST00000623877 1385 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 OR4K17-201ENST00000315543 1032 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 MIR331-201ENST00000362302 94 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 SNORD6-201ENST00000365444 73 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 Z86062.1-201ENST00000406773 777 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 RNU2-65P-201ENST00000410162 185 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 RN7SKP106-201ENST00000410832 272 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC119751.6-201ENST00000416712 186 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 RPL31P12-201ENST00000422587 358 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 PHBP16-201ENST00000446318 950 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AL162151.2-201ENST00000448875 158 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC073264.2-201ENST00000448886 166 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 TPT1P13-201ENST00000449760 499 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 CEACAMP4-201ENST00000457676 421 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC146507.1-201ENST00000468335 354 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC104687.1-201ENST00000485829 412 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 OR52A4P-203ENST00000498233 1014 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 SUMO2P20-201ENST00000520803 283 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC114878.2-201ENST00000604863 1251 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC010435.1-201ENST00000623353 1177 ntBASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RBFOX3A6NFN3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 RNU6-356P-201ENST00000384140 107 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 RNU6-98P-201ENST00000384173 107 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 MIR192-201ENST00000384915 110 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms