Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC022034.3-201ENST00000471393 478 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 HIGD1AP18-201ENST00000520730 278 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 NOP56P3-201ENST00000549457 385 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AL390816.3-201ENST00000604527 1066 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AL356490.1-201ENST00000623079 479 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.77
SMIM28A0A1B0GU29 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 SNORD74.4-201ENST00000364129 80 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 RNA5SP424-201ENST00000390988 115 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 RNU6-244P-201ENST00000391028 104 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 JKAMPP1-201ENST00000413804 919 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 BTF3P9-201ENST00000418784 283 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 OR2X1P-201ENST00000421144 687 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC069157.1-201ENST00000421749 137 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC099336.2-201ENST00000422457 254 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 OR5AW1P-201ENST00000426334 1006 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 MTND2P21-201ENST00000436242 1042 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AL358232.1-201ENST00000448030 501 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC017099.1-201ENST00000448261 1028 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC006480.1-201ENST00000449887 378 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 EIF4A1P11-201ENST00000451239 222 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 CLIC4P1-201ENST00000453177 535 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC099560.2-201ENST00000457554 255 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC018635.1-201ENST00000468292 1030 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 UBA52P3-201ENST00000491303 382 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 RN7SKP157-201ENST00000516174 282 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 SUMO2P20-201ENST00000520803 283 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 NPM1P35-201ENST00000533043 868 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC040174.2-201ENST00000602701 465 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AP003392.5-201ENST00000607857 415 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 AC068254.2-201ENST00000623938 3577 ntBASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.02□□□□□ -1.77
SMIM28A0A1B0GU29 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 HLFP1-201ENST00000402375 499 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 RN7SKP222-201ENST00000410651 315 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC019070.1-201ENST00000415008 1024 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC073136.2-201ENST00000417282 849 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 OR6K4P-201ENST00000423179 955 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 RPS26P47-201ENST00000427219 348 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC073587.1-201ENST00000447093 876 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC034236.1-201ENST00000469891 373 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC106707.2-201ENST00000484182 374 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC104619.4-201ENST00000510773 249 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 CKS1BP1-201ENST00000555221 240 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC006960.3-201ENST00000561845 705 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC015813.4-201ENST00000610469 179 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC025016.1-201ENST00000616746 682 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC131238.1-201ENST00000617135 328 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC233309.1-201ENST00000619522 751 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms