Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC004074.1-201ENST00000421810 1063 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 RHOT1P3-201ENST00000436571 331 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 RPL34P20-201ENST00000442771 351 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC104073.1-201ENST00000451988 151 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 USP9YP10-201ENST00000454868 628 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 RPS4XP12-201ENST00000461747 709 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC147055.4-201ENST00000504399 745 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 USP9YP5-201ENST00000511770 630 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 MIR4436B2-201ENST00000581415 91 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 MIR4436B1-201ENST00000583272 91 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AC097065.2-201ENST00000608159 533 ntBASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A3BPQ9Y5P4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A3BPQ9Y5P4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
COL4A3BPQ9Y5P4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.65□□□□□ -1.51
COL4A3BPQ9Y5P4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A3BPQ9Y5P4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A3BPQ9Y5P4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A3BPQ9Y5P4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 Z73965.1-201ENST00000623412 2297 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 ATP5F1P4-201ENST00000397288 746 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL133270.1-201ENST00000402635 279 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 U3.32-201ENST00000408116 212 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 RN7SKP247-201ENST00000411094 308 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC073335.1-201ENST00000427776 363 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 OR51AB1P-201ENST00000429046 620 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL365396.1-201ENST00000430854 671 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 GTF3AP5-201ENST00000442645 697 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 RPL23AP35-201ENST00000451906 501 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 snoU13.20-201ENST00000459180 104 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 RPL37P6-202ENST00000464216 403 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 RN7SL441P-201ENST00000492388 296 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AP001922.4-201ENST00000526967 290 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 OR5D15P-201ENST00000531671 942 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 PDCD5P1-201ENST00000543528 309 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC008088.1-201ENST00000580993 280 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC011840.5-201ENST00000582125 771 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 MIR4637-201ENST00000582405 84 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL009028.1-201ENST00000604895 802 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AP003117.2-201ENST00000606010 545 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL607023.1-201ENST00000620045 248 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC091905.4-201ENST00000623432 202 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AC231657.1-201ENST00000624313 397 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 AL353662.3-201ENST00000625131 237 ntBASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL4A3BPQ9Y5P4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms