Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC010618.1-201ENST00000469924 477 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC041039.1-201ENST00000485656 536 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC008958.1-201ENST00000511047 682 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC108043.1-201ENST00000512696 574 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 HMGN1P15-201ENST00000513870 295 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC138701.1-201ENST00000524329 714 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 PARP1P2-201ENST00000556806 195 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 HMGB3P26-201ENST00000560051 582 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC095057.3-201ENST00000567102 1157 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AL590392.1-201ENST00000604960 446 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 FAM27D1-201ENST00000612308 341 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AL109620.1-201ENST00000618738 1197 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AL669942.2-201ENST00000620352 697 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC132825.7-201ENST00000638744 335 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 AC090229.1-201ENST00000590983 1609 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 ERCC6-202ENST00000374127 1782 ntBASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4BQ9Y4P1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 NSRP1P1-201ENST00000444067 1693 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 MIR448-201ENST00000362131 111 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 RSL24D1P6-201ENST00000426934 401 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 HLA-N-201ENST00000437516 135 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC009263.1-201ENST00000441193 1239 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC008379.1-201ENST00000463655 464 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 RPS29P19-201ENST00000479709 171 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC093267.1-201ENST00000489176 961 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 BNIP3P41-201ENST00000503774 571 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC104108.1-201ENST00000509930 412 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 OR5H4P-201ENST00000510851 923 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 NDUFB4P12-201ENST00000513465 390 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AP003717.3-201ENST00000544832 1180 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 MIR3939-201ENST00000582614 106 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 EIF4A2P1-201ENST00000587313 1063 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 IPO5P1-202ENST00000600039 287 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AP005229.2-201ENST00000609980 697 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC096586.1-201ENST00000610267 561 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 MIR6864-201ENST00000617935 70 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AL731566.2-201ENST00000618971 317 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 RMST_9.1-201ENST00000619945 193 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AL356121.2-201ENST00000624715 780 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 AC017104.5-201ENST00000637647 639 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 OR52H1-202ENST00000641796 1061 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 NOL8P1-201ENST00000508336 3529 ntBASIC4□□□□□ -1.77
ATG4BQ9Y4P1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ATG4BQ9Y4P1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AL136520.1-201ENST00000600311 1322 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC104446.1-201ENST00000613728 1321 ntBASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4BQ9Y4P1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms