Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC068287.1-201ENST00000430283 295 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 ISCA1P2-201ENST00000438679 421 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 MTND2P4-201ENST00000445034 1004 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 TPTE2P6-202ENST00000445572 1007 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 RPL7L1P1-201ENST00000448259 785 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 MTND2P28-201ENST00000457540 1044 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AL591473.1-201ENST00000464297 313 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC097484.1-201ENST00000471148 389 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 XKRY-201ENST00000510392 1100 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 RNA5SP464-201ENST00000516251 108 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 RN7SKP283-201ENST00000517197 270 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 OR5AN2P-201ENST00000534535 896 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC116553.2-201ENST00000564203 463 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC079171.1-201ENST00000568788 914 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 MTCYBP33-201ENST00000575007 1130 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 NBR2-204ENST00000587322 63 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 VN1R82P-201ENST00000601481 356 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC008745.1-201ENST00000604064 271 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AL031320.1-201ENST00000604177 357 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AP003973.1-201ENST00000604639 691 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC012557.2-201ENST00000605919 418 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC243654.2-201ENST00000612843 443 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AL354976.1-201ENST00000613843 387 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC121761.2-201ENST00000617300 689 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC015914.2-201ENST00000618167 288 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AC015871.5-202ENST00000623252 701 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 CDRT1-208ENST00000630868 794 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 AF001550.2-201ENST00000636643 217 ntBASIC4.81□□□□□ -1.64
VPS4AQ9UN37 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4AQ9UN37 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 SCN1A-220ENST00000641603 12506 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AC109315.1-201ENST00000584143 1347 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 RNU6-931P-201ENST00000363850 107 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 RNVU1-6-201ENST00000364688 164 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 Y_RNA.318-201ENST00000365131 97 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 RNA5SP455-201ENST00000365190 119 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 SNORA68.2-201ENST00000391263 128 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 GSTA8P-201ENST00000404253 637 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 SEPT2P1-201ENST00000419651 180 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 SEPT7P5-201ENST00000434048 306 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AL031663.1-201ENST00000437445 219 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AC093155.1-201ENST00000440164 826 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AC118469.1-201ENST00000442943 488 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AC073587.1-201ENST00000447093 876 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AC104306.1-201ENST00000449702 371 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 RPS27AP8-201ENST00000452665 445 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AC092647.2-201ENST00000452998 253 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 RNU7-125P-201ENST00000458760 62 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 RAP1BP2-201ENST00000478270 544 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 RPL7P18-201ENST00000478965 734 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 GAPDHP36-201ENST00000480688 918 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 LINC00888-204ENST00000487386 421 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS4AQ9UN37 HMGB3P16-201ENST00000508037 287 ntBASIC4.8□□□□□ -1.64
VPS4AQ9UN37 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms