Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC108145.1-201ENST00000503770 153 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC008837.1-201ENST00000511513 412 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 RNA5SP360-201ENST00000516555 118 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 RNU6-1004P-201ENST00000516584 111 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC008694.2-201ENST00000517591 306 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 IGLV3-26-201ENST00000520756 302 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 MTATP6P15-201ENST00000527233 835 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 UBTFL10-201ENST00000528532 562 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 PHBP17-201ENST00000528576 541 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC136624.4-201ENST00000573044 370 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 RN7SL176P-201ENST00000580352 264 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC023509.5-201ENST00000617434 807 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC123767.1-202ENST00000620407 817 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 AC119674.1-212ENST00000641155 993 ntBASIC4.56□□□□□ -1.68
SIX4Q9UIU6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
SIX4Q9UIU6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC005261.4-201ENST00000600047 1385 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 RNA5SP28-201ENST00000363841 119 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 RNU6-236P-201ENST00000363886 106 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 RNU6-452P-201ENST00000384406 107 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AL034374.1-201ENST00000406329 351 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 VN1R8P-201ENST00000407739 893 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC009237.10-201ENST00000414112 510 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 RPL22P18-201ENST00000417197 377 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC246680.2-201ENST00000422106 389 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC004022.1-201ENST00000447766 1066 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 PPIAP21-201ENST00000464473 501 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC021146.3-201ENST00000511911 260 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 KCTD9P2-201ENST00000512203 1013 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC099522.1-202ENST00000514718 367 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC104417.1-201ENST00000523974 751 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC107918.3-201ENST00000533272 382 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC006518.2-201ENST00000542513 940 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC009097.3-201ENST00000563557 1018 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC023824.3-201ENST00000569003 562 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 RN7SL600P-201ENST00000581811 299 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 MIR4697-201ENST00000582977 78 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC023813.4-201ENST00000607580 580 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC231759.1-201ENST00000616455 597 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AC021755.4-201ENST00000616620 456 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 FRG1HP-204ENST00000617940 757 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 MIR8059-201ENST00000620427 81 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 AL133243.3-201ENST00000617415 3004 ntBASIC4.55□□□□□ -1.68
SIX4Q9UIU6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX4Q9UIU6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AP000756.2-201ENST00000624168 2567 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 LINC01109-201ENST00000603837 3081 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 Y_RNA.472-201ENST00000384322 102 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 SNORD116-12-201ENST00000384468 92 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 Y_RNA.578-201ENST00000390903 88 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AL512430.2-201ENST00000406786 339 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 VTA1P1-201ENST00000414044 866 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 BTF3P8-201ENST00000414577 526 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC073335.1-201ENST00000427776 363 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 COX6B1P7-201ENST00000430845 235 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms