Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC021146.8-201ENST00000507455 733 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC008837.2-201ENST00000513076 418 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AP002812.4-201ENST00000532139 286 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC008033.2-201ENST00000542626 177 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC092747.2-201ENST00000545069 983 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC008083.2-201ENST00000546707 476 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AL391156.1-201ENST00000554965 554 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC040958.1-201ENST00000561102 201 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC116553.2-201ENST00000564203 463 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 MIR3915-201ENST00000578518 97 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC011840.5-201ENST00000582125 771 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC005084.1-201ENST00000605160 304 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC092653.1-201ENST00000608509 531 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AP005137.2-201ENST00000609238 400 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AL139418.1-201ENST00000613613 177 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC023158.2-201ENST00000614876 543 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AL359715.5-201ENST00000623431 443 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 AP001273.1-201ENST00000624493 3152 ntBASIC5.07□□□□□ -1.6
DKK3Q9UBP4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
DKK3Q9UBP4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 RN7SKP95-201ENST00000362860 303 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AL035079.1-201ENST00000405210 287 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 COX5BP7-201ENST00000414780 274 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC244035.1-201ENST00000430042 390 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 DLGAP5P1-201ENST00000430307 464 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 CDY14P-201ENST00000431260 1014 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 ATP5F1P1-201ENST00000433775 569 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC091390.1-201ENST00000433904 331 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 USP9YP22-201ENST00000438971 294 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 RPL23AP76-201ENST00000441860 458 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 MTCO2P25-201ENST00000447065 681 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 TCEA1P1-201ENST00000449716 880 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC079776.3-201ENST00000450665 370 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 TPMTP4-201ENST00000450749 678 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 CDY23P-201ENST00000451661 1014 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 PRPF38AP1-201ENST00000451976 933 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC133473.1-201ENST00000455173 299 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC091153.1-201ENST00000466297 402 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 GAPDHP39-201ENST00000481866 979 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AL049874.2-201ENST00000492636 288 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 RPL12P22-201ENST00000519073 490 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AP001317.1-201ENST00000531194 960 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 PCNPP1-201ENST00000552501 511 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 EDDM3DP-201ENST00000554692 434 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 OR1F2P-201ENST00000570470 933 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms