Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 HMGB1P19-201ENST00000517578 577 ntBASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 UBE2NP1-201ENST00000545592 458 ntBASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 MTCO3P22-201ENST00000603219 784 ntBASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 AC244517.3-201ENST00000616254 1235 ntBASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PHRF1Q9P1Y6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 RNA5SP42-201ENST00000364278 115 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 RPL5P16-201ENST00000471467 790 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC139783.2-201ENST00000504847 1145 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 ASNSP4-201ENST00000511103 447 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC124312.4-201ENST00000605533 310 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 SAGE2P-201ENST00000420011 2126 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 RPSAP41-201ENST00000439695 860 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 U3.44-201ENST00000458938 192 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 Vault.1-201ENST00000516474 102 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC008489.1-201ENST00000524271 483 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC010653.1-201ENST00000571108 881 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 DPRXP4-201ENST00000578053 568 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 AC084036.1-201ENST00000609190 508 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 MIR7851-201ENST00000610611 160 ntBASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PHRF1Q9P1Y6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AP000542.2-201ENST00000623199 6179 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 MIR513A2-201ENST00000385249 127 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 U3.19-201ENST00000390893 196 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AC010469.1-201ENST00000463864 576 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AC109925.1-201ENST00000478069 331 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AC037198.2-201ENST00000478845 733 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AP003392.5-201ENST00000607857 415 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AC079298.2-201ENST00000623885 459 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 AL356489.2-201ENST00000566968 3528 ntBASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHRF1Q9P1Y6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AC004944.1-201ENST00000517807 3059 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AC063979.1-201ENST00000415539 377 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 RPS26P15-201ENST00000488067 348 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 RN7SL504P-201ENST00000494496 287 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 HMGB3P13-201ENST00000511263 607 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 RNA5SP341-201ENST00000516261 117 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 SULT1C2P2-201ENST00000562517 294 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 EIF1P6-201ENST00000600054 334 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AC009237.17-201ENST00000618111 748 ntBASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PHRF1Q9P1Y6 AC068254.2-201ENST00000623938 3577 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms