Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC063944.3-201ENST00000609969 533 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AP000255.1-201ENST00000610276 676 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC008147.4-201ENST00000617570 1204 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC145207.9-201ENST00000623802 325 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC083865.1-201ENST00000636634 831 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AL773545.4-201ENST00000637262 310 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AL513478.4-201ENST00000641636 310 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AL132640.2-201ENST00000559968 1698 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
NDE1Q9NXR1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AL590763.1-201ENST00000398297 1545 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 ZNF29P-201ENST00000225587 168 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 RNU1-18P-201ENST00000363062 164 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 RNU5B-1-201ENST00000363286 116 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 RNU6-666P-201ENST00000363499 107 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 MIR659-201ENST00000384963 97 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 Z98941.1-201ENST00000407764 100 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC093698.1-201ENST00000423843 571 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 ARF4P4-201ENST00000439608 520 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 EXOSC3P1-201ENST00000448649 500 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AL354710.1-201ENST00000453641 246 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC096741.1-201ENST00000472250 846 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 RN7SL271P-201ENST00000487601 295 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 HPRT1P1-201ENST00000509498 657 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC091163.3-201ENST00000518269 1144 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC010376.1-201ENST00000522101 334 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AGGF1P5-201ENST00000567900 919 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 MIR4700-201ENST00000578311 74 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 MIR4509-3-201ENST00000578671 94 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 MIR1269B-201ENST00000580405 75 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 MIR4509-2-201ENST00000583920 94 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 MTCO2P2-201ENST00000591258 225 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC079610.2-201ENST00000604818 690 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC010200.2-201ENST00000605098 235 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 CYCSP41-201ENST00000616920 296 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 MIR4509-1-201ENST00000618224 94 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC022079.2-201ENST00000619739 566 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC018445.2-201ENST00000622987 260 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AL078595.3-201ENST00000623815 1166 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 C4BPAP1-201ENST00000415474 1893 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.02□□□□□ -1.77
NDE1Q9NXR1 AC092079.1-201ENST00000558620 1985 ntBASIC4.02□□□□□ -1.77
NDE1Q9NXR1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 RN7SKP149-201ENST00000363008 344 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 RNA5SP443-201ENST00000363083 132 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 U6.112-201ENST00000384129 70 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 MIR320B1-201ENST00000390209 79 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 PGBD4P8-201ENST00000412993 562 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 UBE2V1P9-201ENST00000414760 368 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 SNRPFP1-201ENST00000414761 252 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC115285.1-201ENST00000424879 736 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms