Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MTCO1P35-201ENST00000515270 228 ntBASIC3.79□□□□□ -1.8
TREX1Q9NSU2 RNA5SP164-201ENST00000516533 110 ntBASIC3.79□□□□□ -1.8
TREX1Q9NSU2 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
TREX1Q9NSU2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TREX1Q9NSU2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 DCAF13P3-201ENST00000561147 1334 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC240504.1-201ENST00000395709 845 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AL691447.1-201ENST00000419456 387 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 DNAJC19P1-201ENST00000455312 319 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC010307.1-201ENST00000467206 836 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 NARSP2-201ENST00000518524 679 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC022695.1-201ENST00000522089 237 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 OR4C2P-201ENST00000530855 1064 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC091515.1-201ENST00000548110 679 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AL606490.9-201ENST00000603331 271 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC010680.4-201ENST00000605334 543 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AL354760.1-201ENST00000608357 643 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 uc_338.9-201ENST00000617424 182 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 FP236240.3-201ENST00000623061 327 ntBASIC3.78□□□□□ -1.8
TREX1Q9NSU2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.78□□□□□ -1.8
TREX1Q9NSU2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 RNU6-618P-201ENST00000363518 112 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AL390879.2-203ENST00000426943 1121 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 EXTL2P1-201ENST00000446218 416 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AC006480.1-201ENST00000449887 378 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 UBDP1-202ENST00000457888 382 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AC006511.1-201ENST00000470614 315 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 SNORA70.14-201ENST00000516205 110 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AL049634.3-201ENST00000604968 457 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 ZYXP1-201ENST00000617638 118 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AC139769.3-201ENST00000618383 175 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AC027287.1-201ENST00000553115 1453 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AC106871.1-201ENST00000568324 3102 ntBASIC3.77□□□□□ -1.81
TREX1Q9NSU2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TREX1Q9NSU2 AC096656.1-201ENST00000623826 1364 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AL031985.3-201ENST00000565390 2449 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 SAGE2P-201ENST00000420011 2126 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 SNORA3.3-201ENST00000408712 125 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 RPL7P4-203ENST00000430239 730 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms