Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 RNU1-18P-201ENST00000363062 164 ntBASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 BX119904.1-201ENST00000432026 348 ntBASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 OR1AB1P-201ENST00000585564 761 ntBASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 RNU4-35P-201ENST00000362588 141 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 RNA5SP424-201ENST00000390988 115 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 ZNF603P-201ENST00000405613 487 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 RANP7-201ENST00000418085 644 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 ELOCP18-201ENST00000434209 337 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 OR52Y1P-201ENST00000452418 828 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AC007967.1-201ENST00000455422 1159 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 SYT14P1-201ENST00000481459 721 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 HMGN1P11-201ENST00000508668 303 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AC025946.2-201ENST00000603398 234 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 PRO1804-201ENST00000623780 2050 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AL603766.1-201ENST00000407763 664 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 KRR1P1-201ENST00000419430 803 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AL691447.1-201ENST00000419456 387 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 SDCBPP2-201ENST00000424643 885 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 OR5AW1P-201ENST00000426334 1006 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AC005300.1-201ENST00000428401 373 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 ATP5JP1-201ENST00000431631 322 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 RPS27AP18-201ENST00000515536 459 ntBASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KIAA1549Q9HCM3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AC006480.1-201ENST00000449887 378 ntBASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AC115115.1-201ENST00000449927 248 ntBASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 RNU7-157P-201ENST00000459600 66 ntBASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 RN7SL93P-201ENST00000463035 293 ntBASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AC025518.1-201ENST00000479856 347 ntBASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 AL137072.1-201ENST00000603444 466 ntBASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.24□□□□□ -1.89
KIAA1549Q9HCM3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 FRG1CP-201ENST00000358464 769 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 MIR23A-201ENST00000385245 73 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 RNU2-65P-201ENST00000410162 185 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 RN7SKP177-201ENST00000410567 355 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AC096644.3-201ENST00000416788 338 ntBASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.23□□□□□ -1.89
KIAA1549Q9HCM3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms