Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC005189.1-201ENST00000431286 310 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 TBCAP1-201ENST00000436520 327 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC083863.1-201ENST00000438811 231 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 CBX1P4-201ENST00000439415 457 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC097499.1-201ENST00000444277 208 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 NDUFS5P3-201ENST00000450668 321 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 RPS29P33-201ENST00000456717 146 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 RN7SL93P-201ENST00000463035 293 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 RPL23AP12-201ENST00000467573 473 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 RN7SL860P-201ENST00000473738 223 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 RPS27AP13-201ENST00000498403 237 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC121161.1-201ENST00000510606 652 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC005798.1-201ENST00000513715 387 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 RN7SKP141-201ENST00000516167 338 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 MTND1P36-201ENST00000522384 936 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC099489.2-201ENST00000574976 260 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 EIF1P6-201ENST00000600054 334 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC017076.1-201ENST00000607613 578 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AC139769.3-201ENST00000618383 175 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AP006248.2-201ENST00000623309 592 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 AP000720.1-201ENST00000625091 483 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 MIR3653-201ENST00000625572 110 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 USP9YP4-201ENST00000424401 1745 ntBASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
HDHD3Q9BSH5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC096656.1-201ENST00000623826 1364 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL031985.3-201ENST00000565390 2449 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 ATP5F1P4-201ENST00000397288 746 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 RN7SKP33-201ENST00000410942 340 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 FO393419.3-201ENST00000428741 282 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL353093.1-201ENST00000441292 436 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC092809.1-201ENST00000441469 474 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 ARL5AP2-201ENST00000444698 533 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 UQCRHP4-201ENST00000471686 272 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC015908.1-201ENST00000478739 476 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL161747.1-201ENST00000480068 358 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 TRBV12-2-201ENST00000489763 344 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL132838.2-201ENST00000492041 314 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 SNORA26.10-201ENST00000516427 141 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 IGLVIV-53-201ENST00000520107 367 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 DEFB109D-201ENST00000529497 240 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AP000916.1-201ENST00000533869 835 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms