Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 HIGD1AP6-201ENST00000521833 279 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 HMGB1P40-201ENST00000525121 540 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC044860.2-201ENST00000561005 179 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC010546.1-201ENST00000569391 485 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC128687.1-201ENST00000605304 619 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC112220.3-201ENST00000605502 502 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC005332.6-201ENST00000613178 446 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AL031667.3-201ENST00000620124 655 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC074101.1-201ENST00000637861 241 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX18Q96RF0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX18Q96RF0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC093536.2-201ENST00000565257 1406 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC235565.1-201ENST00000456962 1325 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL512646.1-201ENST00000269395 1077 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 RNU4-21P-201ENST00000362802 126 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL133388.1-201ENST00000404509 287 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 RPL31P54-201ENST00000429803 370 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 CYCSP6-201ENST00000434498 302 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 PPIAP13-201ENST00000434706 478 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 CLUHP1-201ENST00000435012 1190 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 RPL35AP21-201ENST00000437667 333 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC004865.1-201ENST00000442276 1003 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 ZNF114P1-201ENST00000453500 292 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 RN7SL189P-201ENST00000468631 289 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 RPS4XP1-201ENST00000482189 787 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 RN7SL30P-201ENST00000488416 306 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC005912.1-201ENST00000495392 255 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 HIGD1AP14-201ENST00000507617 282 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 MTND1P5-201ENST00000517906 940 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AP001207.1-201ENST00000524051 481 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 OR10G5P-201ENST00000532733 358 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AP000873.5-201ENST00000533906 236 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC115085.1-201ENST00000588924 229 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC095055.1-201ENST00000603472 1113 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL031775.1-201ENST00000607014 887 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC005962.2-201ENST00000611427 652 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL121890.2-201ENST00000617644 465 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC073968.1-201ENST00000618594 637 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AC092192.1-201ENST00000633154 1018 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX18Q96RF0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX18Q96RF0 DBF4P1-201ENST00000412976 1892 ntBASIC4.7□□□□□ -1.66
SNX18Q96RF0 AL590763.1-201ENST00000398297 1545 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms