Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD1Q96NR3 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.48□□□□□ -1.53
PTCHD1Q96NR3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD1Q96NR3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.48□□□□□ -1.53
PTCHD1Q96NR3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 CASC19-221ENST00000641309 1382 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 RNU6-444P-201ENST00000383988 108 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 Y_RNA.509-201ENST00000384506 99 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AP000534.2-201ENST00000412729 568 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AL136231.1-201ENST00000429407 730 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 RPEP2-201ENST00000432149 701 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AL389925.1-201ENST00000432257 728 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 RPL17P49-201ENST00000443728 411 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AL445665.1-202ENST00000452436 324 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 PMCHL2-203ENST00000457791 237 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC090142.1-201ENST00000465776 462 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 RPS15AP17-201ENST00000470598 390 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC007998.1-201ENST00000474156 672 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 TRBV5-2-201ENST00000489095 273 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 TOMM22P4-201ENST00000511318 336 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 snoU109.5-201ENST00000516231 132 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 IGLV3-30-201ENST00000524362 298 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 SNORD39.3-201ENST00000584451 71 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC027243.2-201ENST00000602530 724 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 NRBF2P5-201ENST00000603087 788 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC005034.5-201ENST00000604219 466 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC009027.1-201ENST00000604510 479 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC015712.7-201ENST00000615211 635 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AL355974.3-201ENST00000617383 467 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC139792.3-201ENST00000623525 224 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AC006065.6-201ENST00000625201 545 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 FER-210ENST00000628534 558 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 AL606537.1-201ENST00000607258 2011 ntBASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.47□□□□□ -1.53
PTCHD1Q96NR3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.46□□□□□ -1.53
PTCHD1Q96NR3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.46□□□□□ -1.53
PTCHD1Q96NR3 AL034546.1-201ENST00000623740 3693 ntBASIC5.46□□□□□ -1.53
PTCHD1Q96NR3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.46□□□□□ -1.53
PTCHD1Q96NR3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PTCHD1Q96NR3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCHD1Q96NR3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCHD1Q96NR3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 TRIM51GP-201ENST00000534741 1350 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 MFSD8-219ENST00000641228 2559 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 OR9K1P-201ENST00000326513 941 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 MIR375-201ENST00000362103 64 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AL589872.1-201ENST00000426602 288 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 RPL31P35-201ENST00000431058 377 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 USP24P1-201ENST00000433802 779 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC104850.1-201ENST00000435940 476 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 MTND5P14-201ENST00000441481 1267 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 ARPC3P5-201ENST00000448802 534 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms