Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.04□□□□□ -1.6
USP47Q96K76 AL121766.1-201ENST00000547436 487 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 OR2BH1P-201ENST00000608850 864 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 AC069209.1-201ENST00000619282 651 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.03□□□□□ -1.6
USP47Q96K76 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.03□□□□□ -1.6
USP47Q96K76 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
USP47Q96K76 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.03□□□□□ -1.6
USP47Q96K76 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP47Q96K76 HSFY1P1-201ENST00000423928 1178 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 SKP1P1-201ENST00000438081 489 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.03□□□□□ -1.6
USP47Q96K76 NPM1P39-201ENST00000449818 867 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 SNORD105B-201ENST00000458770 79 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 SNORA59A-201ENST00000459326 152 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 TRBV8-1-201ENST00000481590 279 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.03□□□□□ -1.6
USP47Q96K76 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.03□□□□□ -1.6
USP47Q96K76 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.03□□□□□ -1.6
USP47Q96K76 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.03□□□□□ -1.6
USP47Q96K76 OR5AP1P-201ENST00000529730 940 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 AC099489.2-201ENST00000574976 260 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.03□□□□□ -1.6
USP47Q96K76 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.03□□□□□ -1.6
USP47Q96K76 AL031985.2-201ENST00000600955 480 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 AC133552.5-201ENST00000604266 540 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 AC115621.1-201ENST00000604653 858 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 AC006077.1-201ENST00000604746 343 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 AL732372.2-225ENST00000642124 456 ntBASIC5.03□□□□□ -1.6
USP47Q96K76 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USP47Q96K76 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP47Q96K76 PRO1804-201ENST00000623780 2050 ntBASIC5.02□□□□□ -1.61
USP47Q96K76 AC092111.2-201ENST00000611627 1414 ntBASIC5.02□□□□□ -1.61
USP47Q96K76 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
USP47Q96K76 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP47Q96K76 U3.39-201ENST00000408569 239 ntBASIC5.02□□□□□ -1.61
USP47Q96K76 RN7SKP177-201ENST00000410567 355 ntBASIC5.02□□□□□ -1.61
USP47Q96K76 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.02□□□□□ -1.61
USP47Q96K76 CYCSP35-201ENST00000451978 304 ntBASIC5.02□□□□□ -1.61
USP47Q96K76 DNAJC19P1-201ENST00000455312 319 ntBASIC5.02□□□□□ -1.61
USP47Q96K76 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.02□□□□□ -1.61
USP47Q96K76 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.02□□□□□ -1.61
USP47Q96K76 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.02□□□□□ -1.61
USP47Q96K76 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP47Q96K76 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
USP47Q96K76 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP47Q96K76 FAM35DP-201ENST00000323387 2712 ntBASIC5.01□□□□□ -1.61
USP47Q96K76 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP47Q96K76 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
USP47Q96K76 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP47Q96K76 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USP47Q96K76 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP47Q96K76 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP47Q96K76 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
USP47Q96K76 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP47Q96K76 RPS7P15-201ENST00000415804 584 ntBASIC5.01□□□□□ -1.61
USP47Q96K76 AC074367.1-201ENST00000438685 1125 ntBASIC5.01□□□□□ -1.61
USP47Q96K76 CYCSP32-201ENST00000440548 321 ntBASIC5.01□□□□□ -1.61
USP47Q96K76 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.01□□□□□ -1.61
USP47Q96K76 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.01□□□□□ -1.61
USP47Q96K76 FTH1P24-201ENST00000503502 462 ntBASIC5.01□□□□□ -1.61
USP47Q96K76 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.01□□□□□ -1.61
USP47Q96K76 GMPSP1-201ENST00000514075 579 ntBASIC5.01□□□□□ -1.61
USP47Q96K76 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.01□□□□□ -1.61
USP47Q96K76 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP47Q96K76 DUX4L52-201ENST00000549363 777 ntBASIC5.01□□□□□ -1.61
USP47Q96K76 AL121576.1-201ENST00000556055 276 ntBASIC5.01□□□□□ -1.61
USP47Q96K76 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.01□□□□□ -1.61
USP47Q96K76 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5□□□□□ -1.61
USP47Q96K76 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
USP47Q96K76 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5□□□□□ -1.61
USP47Q96K76 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
USP47Q96K76 AC090337.1-201ENST00000579651 2074 ntBASIC5□□□□□ -1.61
USP47Q96K76 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
USP47Q96K76 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP47Q96K76 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5□□□□□ -1.61
USP47Q96K76 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5□□□□□ -1.61
USP47Q96K76 AC074029.4-201ENST00000624796 1859 ntBASIC5□□□□□ -1.61
USP47Q96K76 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
USP47Q96K76 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP47Q96K76 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5□□□□□ -1.61
USP47Q96K76 AL034379.1-201ENST00000423216 253 ntBASIC5□□□□□ -1.61
USP47Q96K76 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5□□□□□ -1.61
USP47Q96K76 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5□□□□□ -1.61
USP47Q96K76 RPL21P23-201ENST00000446654 460 ntBASIC5□□□□□ -1.61
USP47Q96K76 AC091544.1-201ENST00000484702 348 ntBASIC5□□□□□ -1.61
USP47Q96K76 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5□□□□□ -1.61
USP47Q96K76 RFPL4AP3-201ENST00000515267 345 ntBASIC5□□□□□ -1.61
USP47Q96K76 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5□□□□□ -1.61
USP47Q96K76 EIF4EP5-201ENST00000528228 640 ntBASIC5□□□□□ -1.61
USP47Q96K76 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
USP47Q96K76 AC068790.5-201ENST00000602741 355 ntBASIC5□□□□□ -1.61
USP47Q96K76 AC005000.2-201ENST00000605468 310 ntBASIC5□□□□□ -1.61
USP47Q96K76 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5□□□□□ -1.61
USP47Q96K76 AC243756.2-201ENST00000618406 463 ntBASIC5□□□□□ -1.61
USP47Q96K76 U4.6-201ENST00000621618 127 ntBASIC5□□□□□ -1.61
USP47Q96K76 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5□□□□□ -1.61
USP47Q96K76 AC083899.2-201ENST00000423285 1376 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms