Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC004074.1-201ENST00000421810 1063 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AL593851.1-201ENST00000426171 157 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 NIPA2P1-201ENST00000426223 976 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 RPL31P54-201ENST00000429803 370 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AC241584.1-201ENST00000438469 1241 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.35□□□□□ -1.55
HPS3Q969F9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.35□□□□□ -1.55
HPS3Q969F9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 RPS15AP1-201ENST00000457423 391 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 RNU7-125P-201ENST00000458760 62 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.35□□□□□ -1.55
HPS3Q969F9 AC025674.1-201ENST00000507074 324 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HPS3Q969F9 RN7SKP31-201ENST00000516354 278 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.35□□□□□ -1.55
HPS3Q969F9 SOD1P3-201ENST00000518682 454 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.35□□□□□ -1.55
HPS3Q969F9 SMARCE1P4-201ENST00000523647 241 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS3Q969F9 BNIP3P1-201ENST00000547295 580 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 FKBP1BP1-201ENST00000553366 325 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AC138915.2-201ENST00000569776 97 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.35□□□□□ -1.55
HPS3Q969F9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.35□□□□□ -1.55
HPS3Q969F9 AC010620.1-201ENST00000601088 1102 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AC097505.1-201ENST00000610199 565 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 MIR6748-201ENST00000610433 71 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 AC010608.2-201ENST00000624830 470 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HPS3Q969F9 Z95331.1-201ENST00000623075 23112 ntBASIC5.35□□□□□ -1.55
HPS3Q969F9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.35□□□□□ -1.55
HPS3Q969F9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HPS3Q969F9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HPS3Q969F9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.34□□□□□ -1.55
HPS3Q969F9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.34□□□□□ -1.55
HPS3Q969F9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HPS3Q969F9 CDR1-202ENST00000625883 1485 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 XPOTP1-201ENST00000443317 2398 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HPS3Q969F9 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HPS3Q969F9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HPS3Q969F9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HPS3Q969F9 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HPS3Q969F9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.34□□□□□ -1.55
HPS3Q969F9 AL589647.1-201ENST00000402485 466 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 ARL4AP5-201ENST00000404372 599 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AL136133.1-201ENST00000413694 376 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 FCF1P2-201ENST00000415284 583 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.34□□□□□ -1.55
HPS3Q969F9 MTCO3P1-205ENST00000422088 832 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 RPS26P47-201ENST00000427219 348 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 UBE2V1P1-201ENST00000430836 445 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AL450263.2-201ENST00000439400 589 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 EEF1A1P1-201ENST00000447052 739 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.34□□□□□ -1.55
HPS3Q969F9 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 HNRNPKP5-201ENST00000515300 253 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 AC087373.1-201ENST00000524920 491 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC021006.3-201ENST00000530771 192 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AL356057.1-201ENST00000533798 831 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.34□□□□□ -1.55
HPS3Q969F9 ISCA1P3-201ENST00000577104 373 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 SNORA74C-1-201ENST00000580726 201 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC090616.2-202ENST00000584248 222 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 PIGPP4-201ENST00000584447 307 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC110743.1-201ENST00000584870 478 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC087783.2-201ENST00000605070 562 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HPS3Q969F9 AL139418.1-201ENST00000613613 177 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC012414.7-202ENST00000622705 1090 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC079248.2-201ENST00000623779 326 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AL353662.3-201ENST00000625131 237 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.34□□□□□ -1.55
HPS3Q969F9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HPS3Q969F9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HPS3Q969F9 AC000123.3-201ENST00000624029 4975 ntBASIC5.34□□□□□ -1.55
HPS3Q969F9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.34□□□□□ -1.55
HPS3Q969F9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.34□□□□□ -1.55
HPS3Q969F9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HPS3Q969F9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.56
HPS3Q969F9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
HPS3Q969F9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HPS3Q969F9 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms