Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
HMGB4Q8WW32 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 TCP11X1-202ENST00000622971 1372 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 SUGT1P1-201ENST00000379514 476 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RPL31P52-201ENST00000407532 367 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RNU4-25P-201ENST00000410569 230 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 ELOCP19-201ENST00000411919 318 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 BOLA3P4-201ENST00000418151 400 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 UQCRBP1-201ENST00000421129 336 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL592293.2-201ENST00000422292 996 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL139421.1-201ENST00000423010 169 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RPL12P34-201ENST00000424532 479 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RPL7AP61-201ENST00000443410 636 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 ATG12P2-201ENST00000456830 416 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC245028.2-201ENST00000458673 253 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RPL30P11-201ENST00000495304 339 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RN7SL558P-201ENST00000497468 299 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC010486.2-201ENST00000505572 483 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RNU6-488P-201ENST00000515918 99 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RNU6-1129P-201ENST00000515964 104 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RN7SKP31-201ENST00000516354 278 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AP000926.4-201ENST00000527351 454 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 OSBPL9P5-201ENST00000542581 171 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 RN7SL652P-201ENST00000577769 300 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC005412.1-201ENST00000580812 1049 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 NF1P5-201ENST00000588287 448 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL354760.1-201ENST00000608357 643 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC121761.2-201ENST00000617300 689 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC243756.2-201ENST00000618406 463 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC073348.1-201ENST00000623002 331 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL049536.1-201ENST00000625043 744 ntBASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HMGB4Q8WW32 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 DDX18P5-201ENST00000534547 1306 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC010266.2-201ENST00000564741 3255 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 RNU6-178P-201ENST00000384631 104 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 HNRNPDP2-201ENST00000406475 478 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 RAP1BP1-201ENST00000412709 553 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AL591848.1-201ENST00000413092 322 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 GNG5P5-201ENST00000420444 220 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC233981.1-201ENST00000423224 461 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB4Q8WW32 AC234779.1-201ENST00000425910 285 ntBASIC4.78□□□□□ -1.64
HMGB4Q8WW32 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms