Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 HPRT1P3-201ENST00000539521 576 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC007424.1-203ENST00000554613 687 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 MIR4420-201ENST00000583944 77 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 TPMTP1-201ENST00000592307 737 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC027243.2-201ENST00000602530 724 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 FAM27E4-201ENST00000605259 342 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.812-201ENST00000610788 101 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RMST_3.1-201ENST00000611651 109 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AL352984.2-202ENST00000613699 155 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.784-201ENST00000613803 101 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.787-201ENST00000616522 101 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.780-201ENST00000617336 101 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.801-201ENST00000619005 101 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 MIR193BHG-214ENST00000641765 509 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC010928.1-201ENST00000592477 1447 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC138907.8-201ENST00000623981 2256 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 OR52B1P-201ENST00000316506 909 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RNA5SP273-201ENST00000362484 113 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RNU6-451P-201ENST00000362921 107 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.159-201ENST00000363674 87 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RNA5SP433-201ENST00000364491 114 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.326-201ENST00000365176 113 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.481-201ENST00000384373 102 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC004386.1-201ENST00000393214 761 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC104297.1-201ENST00000393779 870 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 OR2W4P-201ENST00000406496 926 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RN7SKP279-201ENST00000411383 298 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AL359704.1-201ENST00000411586 781 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 BTF3L4P3-201ENST00000418879 476 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 PDCL2P1-201ENST00000419302 352 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC233981.1-201ENST00000423224 461 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AL035410.1-201ENST00000427409 427 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 NANOGP6-201ENST00000429190 847 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RPS24P8-201ENST00000431490 402 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RPEP2-201ENST00000432149 701 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 TAAR7P-201ENST00000436141 242 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 NDUFA5P4-201ENST00000436704 385 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 Z83838.1-202ENST00000456225 839 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RPS20P20-201ENST00000460498 340 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC010486.1-201ENST00000511793 424 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 SNORA81.2-201ENST00000516868 170 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RNU6-445P-201ENST00000516949 107 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 HSPA8P13-201ENST00000523715 472 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC093027.1-201ENST00000546698 429 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AL389895.1-201ENST00000554127 252 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 MIR4260-201ENST00000583107 67 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 NANOGP3-201ENST00000605855 286 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AL451049.1-201ENST00000608672 497 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 AL132765.2-201ENST00000610812 351 ntBASIC5.4□□□□□ -1.54
NUP43Q8NFH3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NUP43Q8NFH3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.55
NUP43Q8NFH3 OR11H5P-202ENST00000641612 1325 ntBASIC5.4□□□□□ -1.55
NUP43Q8NFH3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NUP43Q8NFH3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms