Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RNA5SP391-201ENST00000363456 119 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RN7SKP103-201ENST00000363848 320 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RNU1-89P-201ENST00000384592 164 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 UBE2V1P11-201ENST00000411559 285 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC119751.6-201ENST00000416712 186 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 FAR2P4-202ENST00000425399 584 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 USP12PY-201ENST00000427677 1064 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 MTCO1P54-201ENST00000430139 712 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 ATP5HP2-201ENST00000433885 485 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RPS7P5-201ENST00000441482 581 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AL512326.1-201ENST00000443050 721 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RPS26P30-201ENST00000443431 335 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC068135.1-201ENST00000446164 246 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 DHFRP3-201ENST00000455595 559 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RPL36AP13-201ENST00000457490 317 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RPL7AP6-201ENST00000477943 801 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RPL7P47-201ENST00000497299 556 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 HMGB1P21-201ENST00000502313 581 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 MTATP6P22-201ENST00000507369 598 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC008565.1-201ENST00000509046 885 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 KCTD9P2-201ENST00000512203 1013 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 C1DP5-201ENST00000525775 383 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 OR5M2P-201ENST00000529003 936 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 PCNPP1-201ENST00000552501 511 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 UBE2FP2-201ENST00000566646 462 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 MIR4737-201ENST00000583979 81 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC006946.3-201ENST00000609791 756 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 MIR486-1-201ENST00000612171 68 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AC073569.3-201ENST00000619055 682 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 AL445528.2-201ENST00000620582 470 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 ENSAP3-201ENST00000312710 333 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RNU1-87P-201ENST00000363727 170 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AL035419.1-201ENST00000397037 564 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RN7SKP106-201ENST00000410832 272 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RNU2-6P-201ENST00000411404 190 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 PGBD4P8-201ENST00000412993 562 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RPL23AP27-201ENST00000415161 451 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AL606495.1-201ENST00000422100 813 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AL031736.2-201ENST00000426573 787 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 HMGB3P5-201ENST00000428894 612 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RPL7P4-203ENST00000430239 730 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AL512637.2-201ENST00000431287 1256 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 MTCO1P43-201ENST00000431831 488 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RPL23AP46-201ENST00000438548 490 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AF228730.2-201ENST00000438784 848 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RPL32P14-201ENST00000463196 378 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC007537.2-201ENST00000472093 511 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC078785.3-201ENST00000476607 425 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 PPIAP15-201ENST00000479662 484 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RPL23AP72-201ENST00000492447 435 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 FTH1P24-201ENST00000503502 462 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RN7SKP82-201ENST00000516786 223 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RN7SKP283-201ENST00000517197 270 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC083923.1-201ENST00000523708 376 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms