Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC093801.2-201ENST00000503966 1050 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 SOD1P3-201ENST00000518682 454 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC090151.1-201ENST00000520784 730 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 HIGD1AP6-201ENST00000521833 279 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC100770.1-201ENST00000532310 322 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 MIR4504-201ENST00000577413 92 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC011492.1-201ENST00000600023 315 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC103792.1-201ENST00000603591 919 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC010201.1-201ENST00000605051 540 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AP003117.2-201ENST00000606010 545 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 MLECP1-201ENST00000615893 709 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 MIR7154-201ENST00000620673 73 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC007275.1-201ENST00000621243 671 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC126544.2-201ENST00000625174 749 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC025031.4-201ENST00000621248 3271 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 CPHL1P-201ENST00000461341 3407 ntBASIC4.6□□□□□ -1.67
PRPF39Q86UA1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF39Q86UA1 AC009951.1-201ENST00000623674 2614 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 RNU6-984P-201ENST00000363236 109 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AL356967.1-201ENST00000406305 431 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 RNU4-25P-201ENST00000410569 230 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AL450992.3-201ENST00000413192 568 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC004690.1-201ENST00000418216 328 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AL356387.2-201ENST00000422272 243 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 PTP4A1P7-201ENST00000423476 514 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC012497.1-201ENST00000429392 575 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AL513175.1-201ENST00000431492 780 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 ARF4P4-201ENST00000439608 520 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC011276.1-201ENST00000469688 323 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC008427.1-201ENST00000503102 655 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC119751.1-201ENST00000513357 765 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 RN7SKP122-201ENST00000515923 296 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 DEFB109D-201ENST00000529497 240 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 LINC00622-201ENST00000562811 1570 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 MTND6P33-201ENST00000571794 183 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF39Q86UA1 AC091905.2-201ENST00000623143 306 ntBASIC4.59□□□□□ -1.67
PRPF39Q86UA1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
PRPF39Q86UA1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 MFSD8-220ENST00000641243 1422 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 U3.15-201ENST00000365398 212 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 RNU1-63P-201ENST00000383902 164 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 HSPD1P16-201ENST00000402302 394 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 RPS12P23-201ENST00000419579 400 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 RPL23AP43-201ENST00000446445 471 ntBASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF39Q86UA1 RPL37P6-202ENST00000464216 403 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms