Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR10R3P-201ENST00000361688 942 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 Y_RNA.25-201ENST00000362528 102 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 RNU1-35P-201ENST00000362782 153 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 RN7SKP44-201ENST00000363602 316 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 RNU6-702P-201ENST00000364982 107 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 SNORD115.1-201ENST00000391109 76 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL034403.1-201ENST00000399414 885 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 MIR548F4-201ENST00000408515 105 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 RN7SKP106-201ENST00000410832 272 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 RNU6-847P-201ENST00000411115 108 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 MYL6P5-201ENST00000412707 459 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 RPL34P3-201ENST00000421454 338 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 RPL12P12-201ENST00000424633 501 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL158073.1-201ENST00000426848 1104 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AC023141.3-201ENST00000436698 278 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 RPL32P28-201ENST00000443577 397 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 TCEA1P1-201ENST00000449716 880 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AC016027.4-201ENST00000450866 277 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 SLC31A1P1-201ENST00000451221 567 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 MEMO1P4-201ENST00000453590 386 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AC239798.3-201ENST00000454459 408 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 U8.20-201ENST00000459445 131 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 HMGB3P15-201ENST00000507326 574 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 SNORA40.12-201ENST00000516329 111 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 IGKV3D-25-201ENST00000519599 235 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 POLR3GP2-201ENST00000588366 668 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 TPMTP1-201ENST00000592307 737 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AC018690.1-201ENST00000608144 626 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AL512652.1-201ENST00000619006 500 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AC022106.2-201ENST00000620114 757 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 uc_338.22-201ENST00000622722 187 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 AP000432.2-201ENST00000624164 2048 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 GTF2H2B-203ENST00000508065 1432 ntBASIC5.48□□□□□ -1.53
ATG4DQ86TL0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4DQ86TL0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC123769.1-201ENST00000530992 3192 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 THAP12P9-201ENST00000503971 2360 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 OR9K1P-201ENST00000326513 941 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 Y_RNA.28-201ENST00000362554 111 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 Y_RNA.197-201ENST00000364004 102 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 RNU4-20P-201ENST00000365601 151 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 RNU6-98P-201ENST00000384173 107 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AL136133.1-201ENST00000413694 376 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC079807.1-201ENST00000429993 481 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC093716.1-201ENST00000435923 377 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 CACYBPP1-201ENST00000438592 684 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 FTLP8-201ENST00000446770 267 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 OR52I1-201ENST00000450052 1050 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 SDC4P-201ENST00000453285 601 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC010301.1-201ENST00000473936 355 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 PPP1R11P1-201ENST00000486095 376 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 PSMA2P2-201ENST00000504319 686 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 GAPDHP56-201ENST00000506031 988 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms