Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR659-201ENST00000384963 97 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AF274854.1-201ENST00000413236 615 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC006366.1-201ENST00000422002 759 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC129850.1-201ENST00000436203 508 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC007327.1-201ENST00000447461 264 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 RPL12P20-201ENST00000475538 479 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 RPL5P22-201ENST00000480199 884 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC021146.3-201ENST00000511911 260 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 CYCSP28-201ENST00000534284 321 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 ELOCP32-201ENST00000548625 324 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AADACP1-206ENST00000561502 1193 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC010546.1-201ENST00000569391 485 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 MIR3915-201ENST00000578518 97 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC091178.1-203ENST00000584586 279 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 NTAN1P1-201ENST00000603150 646 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC012557.1-201ENST00000607115 611 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC092354.2-201ENST00000607786 514 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC092653.1-201ENST00000608509 531 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AL451049.1-201ENST00000608672 497 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AL139418.1-201ENST00000613613 177 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 uc_338.18-201ENST00000615451 175 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC006927.3-201ENST00000638789 384 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC005832.2-201ENST00000538921 1430 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AC107021.2-201ENST00000567714 2095 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 MTND4P34-201ENST00000572715 1371 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 UGT2B26P-201ENST00000508672 1613 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 ZNF137P-201ENST00000456718 1920 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 RNU1-20P-201ENST00000363314 162 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 RNA5SP27-201ENST00000363839 119 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 MIR550A3-201ENST00000390735 95 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 RPL23AP59-201ENST00000399415 461 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 DNAJC19P6-201ENST00000401853 280 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC009237.10-201ENST00000414112 510 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 MTCO3P41-201ENST00000414801 328 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL360081.1-201ENST00000428299 555 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC244035.1-201ENST00000430042 390 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 YWHAZP2-201ENST00000440317 728 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC023512.1-201ENST00000444513 499 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 MTND1P1-201ENST00000445453 368 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 MTCYBP3-201ENST00000445588 1137 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 RPL12P26-201ENST00000452430 487 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC005008.1-201ENST00000456151 612 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 RN7SL817P-201ENST00000480777 288 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC104090.1-201ENST00000506341 1171 ntBASIC4.51□□□□□ -1.69
ZNF549Q6P9A3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms