Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC073530.2-201ENST00000623987 261 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC127502.3-201ENST00000636170 1206 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC099063.3-201ENST00000642066 185 ntBASIC4.93□□□□□ -1.62
RNF220Q5VTB9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF220Q5VTB9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 DDX43P2-201ENST00000604753 1354 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 OR10J6P-201ENST00000289731 930 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 RPL21P132-201ENST00000331267 462 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 RNA5SP234-201ENST00000363916 119 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 ARF4P3-201ENST00000397387 509 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 EIF5P1-201ENST00000400019 1231 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AL021407.1-201ENST00000404531 386 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AL024474.1-201ENST00000404655 591 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 RNU6-920P-201ENST00000410926 92 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 RPL31P2-201ENST00000413849 377 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC004987.3-201ENST00000413879 771 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 RPL23AP39-201ENST00000415533 405 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 SEPT2P1-201ENST00000419651 180 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC093698.1-201ENST00000423843 571 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC087385.1-201ENST00000475062 312 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 MTCO3P28-201ENST00000513351 515 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 RNA5SP216-201ENST00000516111 123 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC027308.1-201ENST00000517993 110 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AL161713.1-201ENST00000555538 145 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC090312.1-201ENST00000580637 348 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AL590229.1-201ENST00000603497 542 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC007566.2-201ENST00000603642 413 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 TAS2R6P-201ENST00000605022 826 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 OR2AS2P-201ENST00000606902 342 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC064807.4-201ENST00000607201 407 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC018816.2-201ENST00000621460 353 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 AC108751.5-201ENST00000492880 1336 ntBASIC4.92□□□□□ -1.62
RNF220Q5VTB9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF220Q5VTB9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 OR4G11P-202ENST00000642116 1414 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 AL592437.2-201ENST00000421655 2434 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 AC005294.1-201ENST00000355509 281 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 MIR133B-201ENST00000362210 119 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 RNA5SP319-201ENST00000362768 119 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 RNA5SP88-201ENST00000365560 109 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 ENSAP1-201ENST00000392855 326 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 AC016769.3-201ENST00000396562 315 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 HMGB1P17-201ENST00000403495 628 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 RNA5SP146-201ENST00000410743 123 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 BX276092.4-201ENST00000452056 248 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF220Q5VTB9 AC026410.2-201ENST00000460281 156 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 RN7SL515P-201ENST00000463999 297 ntBASIC4.91□□□□□ -1.62
RNF220Q5VTB9 RPL7P22-201ENST00000466005 733 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms