Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 RN7SL870P-201ENST00000460111 296 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 RPL34P34-201ENST00000465389 354 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 COX6CP14-201ENST00000469580 174 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 RN7SL569P-201ENST00000494652 288 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AC009567.2-201ENST00000502989 349 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 SEPT14P8-201ENST00000508026 178 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 RNU6-1332P-201ENST00000516666 104 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 IGLVV-66-201ENST00000523818 341 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AC011979.2-201ENST00000527568 352 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VARS2Q5ST30 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 AC005341.1-201ENST00000571086 708 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 MIR378C-201ENST00000578683 81 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AC011487.3-201ENST00000593607 453 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AL031666.3-201ENST00000609320 1006 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AC103710.2-201ENST00000609912 942 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AC108706.1-201ENST00000611053 297 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AC015712.7-201ENST00000615211 635 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 MRPL57P3-201ENST00000619218 176 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 AL161637.1-201ENST00000622380 412 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
VARS2Q5ST30 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VARS2Q5ST30 TMEM75-201ENST00000624314 2165 ntBASIC7.46□□□□□ -1.22
VARS2Q5ST30 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VARS2Q5ST30 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VARS2Q5ST30 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 HYDIN2-203ENST00000614586 13885 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 RNY3P13-201ENST00000365542 102 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 RNA5SP122-201ENST00000384457 108 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 RNU6-131P-201ENST00000391144 107 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 Y_RNA.586-201ENST00000391146 98 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 AL121916.1-201ENST00000429405 308 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 TIMM9P1-201ENST00000436122 256 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 RPS23P9-201ENST00000448848 438 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 RNU6-1069P-201ENST00000516612 133 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 RNU2-31P-201ENST00000516954 155 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 Y_RNA.713-201ENST00000517013 96 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 AC116917.1-201ENST00000520558 305 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 DYNLL1P4-201ENST00000549314 266 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 MIR3941-201ENST00000582572 103 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 MIR548Y-201ENST00000582739 110 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 AC036176.3-201ENST00000602456 418 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 AC145423.1-201ENST00000605712 336 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 MIR6861-201ENST00000618657 64 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 AC027559.1-201ENST00000636288 271 ntBASIC7.45□□□□□ -1.22
VARS2Q5ST30 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.45□□□□□ -1.22
VARS2Q5ST30 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
VARS2Q5ST30 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.44□□□□□ -1.22
VARS2Q5ST30 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.44□□□□□ -1.22
VARS2Q5ST30 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VARS2Q5ST30 RNU6-179P-201ENST00000363350 107 ntBASIC7.44□□□□□ -1.22
VARS2Q5ST30 RN7SKP191-201ENST00000364713 306 ntBASIC7.44□□□□□ -1.22
VARS2Q5ST30 RN7SKP189-201ENST00000365042 330 ntBASIC7.44□□□□□ -1.22
VARS2Q5ST30 MRPS6P2-201ENST00000381143 370 ntBASIC7.44□□□□□ -1.22
VARS2Q5ST30 AL031679.1-201ENST00000400616 525 ntBASIC7.44□□□□□ -1.22
VARS2Q5ST30 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
VARS2Q5ST30 RNU4-46P-201ENST00000410818 138 ntBASIC7.44□□□□□ -1.22
VARS2Q5ST30 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms