Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC38Q502W7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 ZNF876P-202ENST00000398732 1485 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC38Q502W7 Z98755.1-201ENST00000407015 1384 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 U8.4-201ENST00000363626 134 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 RNA5SP428-201ENST00000365129 132 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 RNU6-441P-201ENST00000384545 106 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AL357515.1-201ENST00000402967 542 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 NRBF2P2-201ENST00000413087 861 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AL161449.1-201ENST00000414531 1199 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 GJA6P-201ENST00000415117 1042 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC092634.6-201ENST00000418558 192 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 RPS12P5-201ENST00000423449 371 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC005345.1-201ENST00000431868 217 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AL137845.2-201ENST00000444292 988 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 EEF1B2P5-201ENST00000444820 548 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 Z80107.2-201ENST00000445127 392 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 RN7SL610P-201ENST00000463845 291 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 RN7SL817P-201ENST00000480777 288 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC38Q502W7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 MRPS33P2-201ENST00000507850 322 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 PRELID3BP5-201ENST00000508612 460 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC022832.1-201ENST00000530718 645 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC005832.3-201ENST00000537929 631 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 MRPS35P3-201ENST00000603189 709 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC113194.1-201ENST00000606037 500 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC091979.2-201ENST00000607514 214 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC093799.2-201ENST00000610062 578 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC015813.4-201ENST00000610469 179 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC109809.1-201ENST00000619665 545 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC019206.1-201ENST00000621938 425 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC140113.4-201ENST00000622087 222 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC012414.7-202ENST00000622705 1090 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 MKKS-204ENST00000639674 192 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 CASC19-222ENST00000641321 1173 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
CCDC38Q502W7 AC027290.2-201ENST00000623210 18662 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 AL139811.1-201ENST00000424779 2299 ntBASIC4.97□□□□□ -1.61
CCDC38Q502W7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CCDC38Q502W7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC38Q502W7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC38Q502W7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC38Q502W7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CCDC38Q502W7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 RNU1-85P-201ENST00000364127 164 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC38Q502W7 ZNF603P-201ENST00000405613 487 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 RPL23AP47-201ENST00000408017 460 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 LUZP4P1-201ENST00000415420 344 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 RBMY2KP-201ENST00000418221 992 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 MTCO3P1-205ENST00000422088 832 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC098826.2-201ENST00000452011 651 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 RN7SL727P-201ENST00000482164 296 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC006499.3-201ENST00000506077 748 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC112673.1-201ENST00000513168 575 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 RN7SKP66-201ENST00000516681 231 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 SNORA48.10-201ENST00000516965 160 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC027309.2-201ENST00000520566 192 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AP000790.1-201ENST00000528891 737 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 CYCSP28-201ENST00000534284 321 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AP000619.3-201ENST00000535634 1127 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 PDCD5P1-201ENST00000543528 309 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 TVP23CP2-201ENST00000571473 623 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms