Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC009965.2-201ENST00000425328 970 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AL390879.2-203ENST00000426943 1121 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.41□□□□□ -1.86
H3F3AP84243 AC009263.1-201ENST00000441193 1239 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AC098824.1-201ENST00000453565 980 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AC114982.2-201ENST00000461396 358 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AL139099.1-201ENST00000497398 403 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.41□□□□□ -1.86
H3F3AP84243 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.41□□□□□ -1.86
H3F3AP84243 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3AP84243 AC010342.1-201ENST00000514047 877 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.41□□□□□ -1.86
H3F3AP84243 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3AP84243 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.41□□□□□ -1.86
H3F3AP84243 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.41□□□□□ -1.86
H3F3AP84243 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.41□□□□□ -1.86
H3F3AP84243 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.41□□□□□ -1.86
H3F3AP84243 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.41□□□□□ -1.86
H3F3AP84243 Z82195.1-201ENST00000604558 398 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AC090912.3-201ENST00000609775 533 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3AP84243 AL713922.2-201ENST00000619384 716 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 U7.8-201ENST00000619968 63 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.41□□□□□ -1.86
H3F3AP84243 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.41□□□□□ -1.86
H3F3AP84243 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3AP84243 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3AP84243 AC095050.2-201ENST00000510748 1458 ntBASIC3.41□□□□□ -1.86
H3F3AP84243 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.41□□□□□ -1.86
H3F3AP84243 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3AP84243 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
H3F3AP84243 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.4□□□□□ -1.86
H3F3AP84243 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
H3F3AP84243 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
H3F3AP84243 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
H3F3AP84243 NCAPGP1-201ENST00000505112 1814 ntBASIC3.4□□□□□ -1.86
H3F3AP84243 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
H3F3AP84243 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.4□□□□□ -1.87
H3F3AP84243 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H3F3AP84243 MIR30B-201ENST00000384850 88 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.4□□□□□ -1.87
H3F3AP84243 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 NPM1P24-201ENST00000428039 894 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 RPS26P40-201ENST00000435209 294 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 SNORA71B-202ENST00000439232 272 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.4□□□□□ -1.87
H3F3AP84243 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.4□□□□□ -1.87
H3F3AP84243 AC005229.2-201ENST00000456995 399 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.4□□□□□ -1.87
H3F3AP84243 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 RAC1P2-201ENST00000511164 579 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 NPM1P41-201ENST00000512920 831 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.87
H3F3AP84243 RN7SKP141-201ENST00000516167 338 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.4□□□□□ -1.87
H3F3AP84243 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.4□□□□□ -1.87
H3F3AP84243 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.4□□□□□ -1.87
H3F3AP84243 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 BNIP3P5-201ENST00000562290 498 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.4□□□□□ -1.87
H3F3AP84243 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.4□□□□□ -1.87
H3F3AP84243 ABI1P1-201ENST00000603375 1120 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 SNORA62.6-201ENST00000606322 83 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 AC007620.3-201ENST00000608131 497 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 AL354760.1-201ENST00000608357 643 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 C2orf27A-204ENST00000623058 969 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.4□□□□□ -1.87
H3F3AP84243 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.87
H3F3AP84243 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H3F3AP84243 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
H3F3AP84243 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
H3F3AP84243 AC007685.1-201ENST00000329806 452 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 AL591419.1-201ENST00000427423 339 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.39□□□□□ -1.87
H3F3AP84243 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.39□□□□□ -1.87
H3F3AP84243 AL353093.1-201ENST00000441292 436 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.39□□□□□ -1.87
H3F3AP84243 UBDP1-202ENST00000457888 382 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
H3F3AP84243 AC068305.1-201ENST00000497406 726 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
H3F3AP84243 USP9YP5-201ENST00000511770 630 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 RNA5SP309-201ENST00000516670 106 ntBASIC3.39□□□□□ -1.87
H3F3AP84243 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.39□□□□□ -1.87
H3F3AP84243 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms