Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 HMGN1P24-201ENST00000412282 298 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 AC073069.1-201ENST00000428657 441 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.49□□□□□ -2.01
PRKDCP78527 RN7SL863P-201ENST00000462370 296 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.49□□□□□ -2.01
PRKDCP78527 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.49□□□□□ -2.01
PRKDCP78527 AC073335.1-201ENST00000427776 363 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.49□□□□□ -2.01
PRKDCP78527 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC2.49□□□□□ -2.01
PRKDCP78527 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.49□□□□□ -2.01
PRKDCP78527 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PRKDCP78527 AC100793.4-201ENST00000613683 429 ntBASIC2.49□□□□□ -2.01
PRKDCP78527 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PRKDCP78527 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.48□□□□□ -2.01
PRKDCP78527 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.48□□□□□ -2.01
PRKDCP78527 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 AC020656.2-201ENST00000613291 5309 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKDCP78527 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKDCP78527 AC010480.1-201ENST00000624823 684 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.48□□□□□ -2.01
PRKDCP78527 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 VDAC2P1-201ENST00000399358 958 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 MYL8P-204ENST00000431574 518 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 RPS4XP2-201ENST00000458402 793 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.48□□□□□ -2.01
PRKDCP78527 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.48□□□□□ -2.01
PRKDCP78527 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC2.48□□□□□ -2.01
PRKDCP78527 RNU1-18P-201ENST00000363062 164 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKDCP78527 U3.39-201ENST00000408569 239 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 ISCA1P6-201ENST00000427740 390 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 AC093156.1-201ENST00000440382 670 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 RPL7P12-201ENST00000446719 750 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKDCP78527 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKDCP78527 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC2.48□□□□□ -2.01
PRKDCP78527 AC025754.2-201ENST00000606491 432 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 AC015922.4-201ENST00000612568 690 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 AC015871.5-202ENST00000623252 701 ntBASIC2.48□□□□□ -2.01
PRKDCP78527 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRKDCP78527 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.48□□□□□ -2.01
PRKDCP78527 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRKDCP78527 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PRKDCP78527 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PRKDCP78527 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.47□□□□□ -2.01
PRKDCP78527 AL672296.1-201ENST00000427780 2158 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 MTCO1P9-201ENST00000505577 1534 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.47□□□□□ -2.01
PRKDCP78527 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
PRKDCP78527 AC233981.1-201ENST00000423224 461 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 AC126389.1-201ENST00000477436 290 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.47□□□□□ -2.01
PRKDCP78527 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.47□□□□□ -2.01
PRKDCP78527 RN7SL371P-201ENST00000578099 267 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRKDCP78527 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRKDCP78527 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.47□□□□□ -2.01
PRKDCP78527 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PRKDCP78527 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PRKDCP78527 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRKDCP78527 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC2.47□□□□□ -2.01
PRKDCP78527 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.47□□□□□ -2.01
PRKDCP78527 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.47□□□□□ -2.01
PRKDCP78527 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
PRKDCP78527 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PRKDCP78527 Z95114.1-201ENST00000624264 14574 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.47□□□□□ -2.01
PRKDCP78527 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.47□□□□□ -2.01
PRKDCP78527 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.47□□□□□ -2.01
PRKDCP78527 OR5AW1P-201ENST00000426334 1006 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PRKDCP78527 RPS29P21-201ENST00000496272 170 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 HSPD1P11-201ENST00000508643 1702 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 AC128687.2-201ENST00000609657 566 ntBASIC2.47□□□□□ -2.01
PRKDCP78527 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PRKDCP78527 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRKDCP78527 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms